RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAM47E-STBD1D6RA91 191 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 SMARCA5O60264 1052 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 PEX10O60683 326 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 CRTAMO95727 393 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 SOD2P04179 222 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 NTRK1P04629 796 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 PDE6BP35913 854 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 MAPKAPK2P49137 400 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 GUCY1A3Q02108 690 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 PAK1Q13153 545 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 HABP4Q5JVS0 413 aaKnown RBP5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 MPZL3Q6UWV2 235 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 RPTNQ6XPR3 784 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 MTDHQ86UE4 582 aaKnown RBP5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 DCP2Q8IU60 420 aaKnown RBP5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 NINJ1Q92982 152 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 PEX11GQ96HA9 241 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 MAGEB10Q96LZ2 347 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 EPB41L1Q9H4G0 881 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 INTS7Q9NVH2 962 aaKnown RBP5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 PPARGC1AQ9UBK2 798 aaKnown RBP5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 NUDT5Q9UKK9 219 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 COA3Q9Y2R0 106 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 PCDHA9Q9Y5H5 950 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 CD2APQ9Y5K6 639 aa5.6□□□□□ -1.51
HMGB1P11-201ENST00000413899 DGKIO75912 1065 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 SDHBP21912 280 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 SLC9A5Q14940 896 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 RAB3GAP1Q15042 981 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 PLEKHN1Q494U1 663 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 EMC4Q5J8M3 183 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 EGFLAMQ63HQ2 1017 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 OLFML2BQ68BL8 750 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 CYP4F22Q6NT55 531 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 FGD2Q7Z6J4 655 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 SEC14L1Q92503 715 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 CHAMP1Q96JM3 812 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 EPB41L4BQ9H329 900 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 MAGEC2Q9UBF1 373 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 PCDHA8Q9Y5H6 950 aa5.59□□□□□ -1.51
HMGB1P11-201ENST00000413899 NUDT19A8MXV4 375 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 TADA3O75528 432 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 DNAJC8O75937 253 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 RASGRP1O95267 797 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 NPTXRO95502 500 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 ASLP04424 464 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 APPP05067 770 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 KCNA6P17658 529 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 CHRNA2Q15822 529 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 DALRD3Q5D0E6 543 aaKnown RBP5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 PRR23BQ6ZRT6 265 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 FBXW5Q969U6 566 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 TSPAN17Q96FV3 270 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 PDGFDQ9GZP0 370 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 NSUN3Q9H649 340 aaKnown RBP5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 IPPKQ9H8X2 491 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZNF652Q9Y2D9 606 aa5.58□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZC3H12DA2A288 527 aaKnown RBP5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 LRRC10BA6NIK2 292 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 B4E1Z4 1266 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 F8W031 263 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZBTB7AO95365 584 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 CKMP06732 381 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 VIPR1P32241 457 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 PRR5P85299 388 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 SPIRE1Q08AE8 756 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 TAF7LQ5H9L4 462 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 C16orf59Q7L2K0 433 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 OTOP3Q7RTS5 596 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 NIM1KQ8IY84 436 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 PANK1Q8TE04 598 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 JAM3Q9BX67 310 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 CELF4Q9BZC1 486 aaKnown RBP5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 AP5M1Q9H0R1 490 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 TMX1Q9H3N1 280 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 SLC6A20Q9NP91 592 aa5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 DCP1AQ9NPI6 582 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P11-201ENST00000413899 TEX51A0A1B0GUA7 166 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 MYOCOSA0A1B0GUC4 107 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 HGSO14964 777 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 GSTA4O15217 222 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 SGSM2O43147 1006 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 MAFKO60675 156 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 SEMA7AO75326 666 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 CLSTN1O94985 981 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 SDSP20132 328 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 POU3F2P20265 443 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 IGFALSP35858 605 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 GYS2P54840 703 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 MESP2Q0VG99 397 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 MLANAQ16655 118 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 TM4SF20Q53R12 229 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 FAM47CQ5HY64 1035 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 STEAP3Q658P3 488 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZC3H14Q6PJT7 736 aaKnown RBP5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZNF605Q86T29 641 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZC3H7AQ8IWR0 971 aaKnown RBP5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 UHMK1Q8TAS1 419 aaKnown RBP5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 PHOSPHO1Q8TCT1 267 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms