RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 PDE8AO60658 829 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 LEFTY1O75610 366 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 KRT1P04264 644 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 EPHX2P34913 555 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 EXOSC9Q06265 439 aaKnown RBP6.65□□□□□ -1.34
LINC00342-201ENST00000412393 KIAA2012Q0VF49 1180 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 NEXNQ0ZGT2 675 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 TTLL4Q14679 1199 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 PRR23BQ6ZRT6 265 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 PBXIP1Q96AQ6 731 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 CCDC86Q9H6F5 360 aaKnown RBP6.65□□□□□ -1.34
LINC00342-201ENST00000412393 ZNRF3Q9ULT6 936 aa6.65□□□□□ -1.34
LINC00342-201ENST00000412393 PSME4Q14997 1843 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 SCN9AQ15858 1988 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 FZD6O60353 706 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 RNGTTO60942 597 aaKnown RBP6.64□□□□□ -1.35
LINC00342-201ENST00000412393 VAMP4O75379 141 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 IGKV5-2P06315 115 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 TMEM253P0C7T8 217 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 LIG1P18858 919 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 ITIH2P19823 946 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 CTSWP56202 376 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 RPS8P62241 208 aaKnown RBP6.64□□□□□ -1.35
LINC00342-201ENST00000412393 CXCL9Q07325 125 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 CCDC152Q4G0S7 254 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 CIAPIN1Q6FI81 312 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 PNMA8AQ86V59 439 aaPredicted RBP6.64□□□□□ -1.35
LINC00342-201ENST00000412393 SPACA3Q8IXA5 215 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 MYH16Q9H6N6 1097 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 PRDM7Q9NQW5 492 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 CDHR2Q9BYE9 1310 aa6.64□□□□□ -1.35
LINC00342-201ENST00000412393 EIF5BO60841 1220 aaKnown RBP6.63□□□□□ -1.35
LINC00342-201ENST00000412393 RAD17O75943 681 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 POLR3DP05423 398 aaPredicted RBP6.63□□□□□ -1.35
LINC00342-201ENST00000412393 INHBBP09529 407 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 GDNFP39905 211 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 EPS15P42566 896 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 GPSM2P81274 684 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 CWF19L2Q2TBE0 894 aaKnown RBP6.63□□□□□ -1.35
LINC00342-201ENST00000412393 TOP6BLQ8N6T0 577 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 DNAAF4Q8WXU2 420 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 HEXIM2Q96MH2 286 aaKnown RBP6.63□□□□□ -1.35
LINC00342-201ENST00000412393 EHD4Q9H223 541 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 CD320Q9NPF0 282 aa6.63□□□□□ -1.35
LINC00342-201ENST00000412393 PASKQ96RG2 1323 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 PITPNM2Q9BZ72 1349 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 ZNF862O60290 1169 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 GSTP1P09211 210 aaKnown RBP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 GMPSP49915 693 aaPredicted RBP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 ERVK-24P63145 666 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 TNIP1Q15025 636 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 KCNA10Q16322 511 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 MAP1SQ66K74 1059 aaPredicted RBP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 USP50Q70EL3 339 aaPredicted RBP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 FAM214BQ7L5A3 538 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 UBE3BQ7Z3V4 1068 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 ANKRD18AQ8IVF6 992 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 CNTROBQ8N137 903 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 JMYQ8N9B5 988 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 RNF214Q8ND24 703 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 TTLL11Q8NHH1 800 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 TBC1D16Q8TBP0 767 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 WDR89Q96FK6 387 aaPredicted RBP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 CDC5LQ99459 802 aaKnown RBP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 EYA3Q99504 573 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 BCL2L13Q9BXK5 485 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 DBNDD1Q9H9R9 158 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 SSU72Q9NP77 194 aaKnown RBP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 ADARB2Q9NS39 739 aaKnown RBP6.62□□□□□ -1.35
LINC00342-201ENST00000412393 PODXL2Q9NZ53 605 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 GPRC5DQ9NZD1 345 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 POLLQ9UGP5 575 aa6.62□□□□□ -1.35
LINC00342-201ENST00000412393 ZNF521Q96K83 1311 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 YDJCA8MPS7 323 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 NPIPB6E9PJ23 425 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 ECE2O60344 883 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 UFL1O94874 794 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 GLDCP23378 1020 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 ANP32AP39687 249 aaKnown RBP6.61□□□□□ -1.35
LINC00342-201ENST00000412393 GCKRQ14397 625 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 LINS1Q8NG48 757 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 GPR101Q96P66 508 aaPredicted RBP6.61□□□□□ -1.35
LINC00342-201ENST00000412393 ZC3H12CQ9C0D7 883 aaKnown RBP6.61□□□□□ -1.35
LINC00342-201ENST00000412393 GREM2Q9H772 168 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 A0A1B0GUL6 1792 aa6.61□□□□□ -1.35
LINC00342-201ENST00000412393 RTL9Q8NET4 1388 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 XDHP47989 1333 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 TCAF2A6NFQ2 919 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 TMEM88BA6NKF7 163 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 F6X3S4 739 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 H7C1D1 291 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 PSMD14O00487 310 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 CASP7P55210 303 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 PPP2R3AQ06190 1150 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 NKPD1Q17RQ9 610 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 ISL2Q96A47 359 aa6.6□□□□□ -1.35
LINC00342-201ENST00000412393 PLA2G12BQ9BX93 195 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms