RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ATP2A1O14983 1001 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 MSH4O15457 936 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 CAVIN2O95810 425 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 HOXA7P31268 230 aaPredicted RBP15.85■□□□□ 0.13
GPNMB-203ENST00000409458 SARSP49591 514 aaKnown RBP15.85■□□□□ 0.13
GPNMB-203ENST00000409458 RPS6P62753 249 aaKnown RBP15.85■□□□□ 0.13
GPNMB-203ENST00000409458 DPYDQ12882 1025 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 MOGSQ13724 837 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 PDIA5Q14554 519 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 POTEEQ6S8J3 1075 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 SLFN12Q8IYM2 578 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 SMARCE1Q969G3 411 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 CCDC34Q96HJ3 373 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 TEX13BQ9BXU2 312 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 NMRK2Q9NPI5 230 aa15.85■□□□□ 0.13
GPNMB-203ENST00000409458 FRMPD4Q14CM0 1322 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 TBX3O15119 743 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 RNF207Q6ZRF8 634 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 SAMD3Q8N6K7 520 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 IL31RAQ8NI17 732 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 SPATA20Q8TB22 786 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 NUDT12Q9BQG2 462 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 MAP3K20Q9NYL2 800 aaKnown RBP15.84■□□□□ 0.13
GPNMB-203ENST00000409458 PCDHA12Q9UN75 941 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 AGTPBP1Q9UPW5 1226 aa15.84■□□□□ 0.13
GPNMB-203ENST00000409458 BMP6P22004 513 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 GRB10Q13322 594 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 PLS1Q14651 629 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 IQCB1Q15051 598 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 NSMFQ6X4W1 530 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 LBX2Q6XYB7 198 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 SNX29Q8TEQ0 813 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 ZFP91Q96JP5 570 aaPredicted RBP15.83■□□□□ 0.13
GPNMB-203ENST00000409458 PNMA5Q96PV4 448 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 BLZF1Q9H2G9 400 aa15.83■□□□□ 0.13
GPNMB-203ENST00000409458 LCTP09848 1927 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 GTPBP6O43824 516 aaPredicted RBP15.83■□□□□ 0.12
GPNMB-203ENST00000409458 PEX10O60683 326 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 STAT3P40763 770 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 SPIRE1Q08AE8 756 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 CUL4BQ13620 913 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 ZNF526Q8TF50 670 aaPredicted RBP15.83■□□□□ 0.12
GPNMB-203ENST00000409458 CALML4Q96GE6 196 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 FAM20AQ96MK3 541 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 PURBQ96QR8 312 aaKnown RBP15.83■□□□□ 0.12
GPNMB-203ENST00000409458 TAAR1Q96RJ0 339 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 GBA2Q9HCG7 927 aaPredicted RBP15.83■□□□□ 0.12
GPNMB-203ENST00000409458 BTBD7Q9P203 1132 aa15.83■□□□□ 0.12
GPNMB-203ENST00000409458 SMC2O95347 1197 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 IRX3P78415 501 aaPredicted RBP15.82■□□□□ 0.12
GPNMB-203ENST00000409458 BAATQ14032 418 aaPredicted RBP15.82■□□□□ 0.12
GPNMB-203ENST00000409458 MORC3Q14149 939 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 TKFCQ3LXA3 575 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 TMEM119Q4V9L6 283 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 CEP55Q53EZ4 464 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 KRT79Q5XKE5 535 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 PLA2G4DQ86XP0 818 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 DHX40Q8IX18 779 aaKnown RBP15.82■□□□□ 0.12
GPNMB-203ENST00000409458 SLC10A4Q96EP9 437 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 ASCC2Q9H1I8 757 aaPredicted RBP15.82■□□□□ 0.12
GPNMB-203ENST00000409458 CUEDC2Q9H467 287 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 ACAD9Q9H845 621 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 VAV3Q9UKW4 847 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 RABGAP1Q9Y3P9 1069 aa15.82■□□□□ 0.12
GPNMB-203ENST00000409458 UNCXA6NJT0 531 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 AP5Z1O43299 807 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
GPNMB-203ENST00000409458 EIF2AK2P19525 551 aaKnown RBP15.81■□□□□ 0.12
GPNMB-203ENST00000409458 SETQ01105 290 aaPredicted RBP15.81■□□□□ 0.12
GPNMB-203ENST00000409458 ECM1Q16610 540 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 GPAT2Q6NUI2 795 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 FASTKD5Q7L8L6 764 aaKnown RBP15.81■□□□□ 0.12
GPNMB-203ENST00000409458 AOPEPQ8N6M6 819 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 TRIML1Q8N9V2 468 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 ANP32BQ92688 251 aaKnown RBP15.81■□□□□ 0.12
GPNMB-203ENST00000409458 BPIFA3Q9BQP9 254 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 NAT10Q9H0A0 1025 aaKnown RBP15.81■□□□□ 0.12
GPNMB-203ENST00000409458 MAGEF1Q9HAY2 307 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 KBTBD4Q9NVX7 518 aa15.81■□□□□ 0.12
GPNMB-203ENST00000409458 MEIS1O00470 390 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 ITGB5P18084 799 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 HERVK_113P62684 666 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 FKBP1BP68106 108 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 SNAPC2Q13487 334 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 PGM5Q15124 567 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 PCNX4Q63HM2 1172 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 NCAPH2Q6IBW4 605 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 MB21D1Q8N884 522 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 SLC5A5Q92911 643 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 CDK5RAP3Q96JB5 506 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 MXRA8Q9BRK3 442 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 A1CFQ9NQ94 594 aaKnown RBP15.8■□□□□ 0.12
GPNMB-203ENST00000409458 PXMP2Q9NR77 195 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 BLOC1S4Q9NUP1 217 aa15.8■□□□□ 0.12
GPNMB-203ENST00000409458 CNMDO75829 334 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 ARP10275 920 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 MRPS9P82933 396 aaKnown RBP15.79■□□□□ 0.12
GPNMB-203ENST00000409458 CCDC173Q0VFZ6 552 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 HYIQ5T013 277 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 KCNK18Q7Z418 384 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms