RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 DAAM2Q86T65 1068 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 IGSF22Q8N9C0 903 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 PPP1R9BQ96SB3 815 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 GBA2Q9HCG7 927 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ALDH1A1P00352 501 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 RGS2P41220 211 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 TFAMQ00059 246 aaKnown RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 KLHL30Q0D2K2 578 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF449Q6P9G9 518 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF365Q70YC5 407 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 MB21D1Q8N884 522 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 EXOC4Q96A65 974 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 IQCDQ96DY2 449 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CAPZA3Q96KX2 299 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 C16orf45Q96MC5 204 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 GCOM2Q9BZD3 368 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 NUCKS1Q9H1E3 243 aaKnown RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 TSPYL2Q9H2G4 693 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CACYBPQ9HB71 228 aaKnown RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 METTL14Q9HCE5 456 aaKnown RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 NEXMIFQ5QGS0 1516 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 A6NJR5 290 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 GOLGA8CPA6NN73 597 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SH2B2O14492 632 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ENTPD3O75355 529 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 PDIA3P30101 505 aaKnown RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CIITAP33076 1130 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 TSPY1Q01534 308 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 COG2Q14746 738 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 UAP1Q16222 522 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CFAP157Q5JU67 520 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SAMD7Q7Z3H4 446 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CCDC25Q86WR0 208 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SYCE1Q8N0S2 351 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SIX6OS1Q8N1H7 587 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 NME8Q8N427 588 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CCDC26Q8TAB7 109 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 RASGRP4Q8TDF6 673 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 TBC1D22BQ9NU19 505 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 TAB2Q9NYJ8 693 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 INO80Q9ULG1 1556 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 KDM6AO15550 1401 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 PRPF3O43395 683 aaKnown RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ADAM9Q13443 819 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CLUL1Q15846 466 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ME3Q16798 604 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ARMCX2Q7L311 632 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF34Q8IZ26 560 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 STAMQ92783 540 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 MSTO1Q9BUK6 570 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SRRTQ9BXP5 876 aaKnown RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SH3GLB2Q9NR46 395 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SETBP1Q9Y6X0 1596 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 MEIS1O00470 390 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 MED7O43513 233 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SLC25A27O95847 323 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SKILP12757 684 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 ALDH3A1P30838 453 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 PRPSAP1Q14558 356 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SLFN12LQ6IEE8 588 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 PPP1R18Q6NYC8 613 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 RNF180Q86T96 592 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 DGKHQ86XP1 1220 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CCDC89Q8N998 374 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 RNF139Q8WU17 664 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 OSBP2Q969R2 916 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 FAM84BQ96KN1 310 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 AK8Q96MA6 479 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CLSTN2Q9H4D0 955 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 TOPORSQ9NS56 1045 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CPSF3Q9UKF6 684 aaKnown RBP5.5□□□□□ -1.53
SCN3A-203ENST00000409101 UBE2Q2LH0YL09 131 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 MMP14P50281 582 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 CTTNQ14247 550 aaKnown RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 SF3B3Q15393 1217 aaKnown RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 FAM26FQ5R3K3 315 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 CCDC122Q5T0U0 273 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 PRAMEF18Q5VWM3 479 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 MAIP1Q8WWC4 291 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 PRPF31Q8WWY3 499 aaKnown RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 LARP4BQ92615 738 aaKnown RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 MTRQ99707 1265 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 OSBPL5Q9H0X9 879 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 ZSWIM4Q9H7M6 989 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 ARMCX3Q9UH62 379 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 WDR64B1ANS9 1081 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 GIPC1O14908 333 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 WDR46O15213 610 aaKnown RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 GTPBP6O43824 516 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 ALCAMQ13740 583 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 MYSM1Q5VVJ2 828 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 RNF219Q5W0B1 726 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 HHIPL2Q6UWX4 724 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 TAOK1Q7L7X3 1001 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 HAUS1Q96CS2 278 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 CUEDC2Q9H467 287 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 ZSWIM6Q9HCJ5 1215 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 MAP3K20Q9NYL2 800 aaKnown RBP5.49□□□□□ -1.53
SCN3A-203ENST00000409101 THAP12O43422 761 aa5.49□□□□□ -1.53
SCN3A-203ENST00000409101 PRELPP51888 382 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms