RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 DUSP28Q4G0W2 176 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 TMEM67Q5HYA8 995 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 IQSEC1Q6DN90 963 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 FBXO11Q86XK2 927 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 PCSK9Q8NBP7 692 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 NCOA7Q8NI08 942 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 PIBF1Q8WXW3 757 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 PIGSQ96S52 555 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 LRRC2Q9BYS8 371 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 TBX21Q9UL17 535 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 RBM47A0AV96 593 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 ARVCFO00192 962 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 RAG1P15918 1043 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 NBPF20Q3BBV1 942 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 RAB11FIP4Q86YS3 637 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 FAM126BQ8IXS8 530 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 TOX2Q96NM4 488 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 AP5M1Q9H0R1 490 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 TRPV6Q9H1D0 765 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 ANO2Q9NQ90 1003 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 UMODL1Q5DID0 1318 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 BAZ2BQ9UIF8 2168 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 DCDC2CA8MYV0 355 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 ZBTB5O15062 677 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 PRC1O43663 620 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 CFBP00751 764 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 EIF2AK2P19525 551 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 RXRAP19793 462 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 BMP2KLQ5H9B9 411 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 CMTR1Q8N1G2 835 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 SLC43A3Q8NBI5 491 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 DNERQ8NFT8 737 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 RMDN3Q96TC7 470 aa11.19□□□□□ -0.62
NIF3L1-202ENST00000409020 SH2B2O14492 632 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 CD4P01730 458 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 ITGA7Q13683 1181 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 LY6KQ17RY6 165 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 SEPT14Q6ZU15 432 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 C16orf59Q7L2K0 433 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 DEFB123Q8N688 67 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 OR6J1Q8NGC5 347 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 IL31RAQ8NI17 732 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 AMNQ9BXJ7 453 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 PPP1R12CQ9BZL4 782 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 RIOX1Q9H6W3 641 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 MRPL11Q9Y3B7 192 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 PCDHA1Q9Y5I3 950 aa11.18□□□□□ -0.62
NIF3L1-202ENST00000409020 ERICH2A1L162 156 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 ESPNB1AK53 854 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 B4GALT4O60513 344 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 TIMP1P01033 207 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 MYL3P08590 195 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 TXNP10599 105 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 CYP2C18P33260 490 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 HSD17B4P51659 736 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 PURAQ00577 322 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 PPP2R5BQ15173 497 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 CCDC62Q6P9F0 684 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 FAM43BQ6ZT52 329 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 ZNF654Q8IZM8 581 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 FAM161BQ96MY7 647 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 CCDC94Q9BW85 323 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 PXMP2Q9NR77 195 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 TRMT13Q9NUP7 481 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 PNMA2Q9UL42 364 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 Q9Y3F1 56 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 LOC102724159A0A0B4J2E5 919 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 SORBS3O60504 671 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 RGS20O76081 388 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 ACRP10323 421 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 CSF2RAP15509 400 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 FPGSQ05932 587 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 PWP2Q15269 919 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 ARHGEF16Q5VV41 709 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 CATIPQ7Z7H3 387 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 MCF2L2Q86YR7 1114 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 NSUN6Q8TEA1 469 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 TCEANC2Q96MN5 208 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 STK24Q9Y6E0 443 aa11.17□□□□□ -0.62
NIF3L1-202ENST00000409020 MROH7Q68CQ1 1323 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 MYH6P13533 1939 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 hCG_1642624A0A1W2PR95 340 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 GHRHRQ02643 423 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 ARHGAP1Q07960 439 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 SART3Q15020 963 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 ADCK5Q3MIX3 580 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 FAM109BQ6ICB4 259 aaPredicted RBP11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 MFSD5Q6N075 450 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.16□□□□□ -0.621e-7■□□□□ 9.6
NIF3L1-202ENST00000409020 TSPYL1Q9H0U9 437 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms