RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 SLC10A4Q96EP9 437 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 PDLIM2Q96JY6 352 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 RIT2Q99578 217 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 PANK2Q9BZ23 570 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 DNAJC25Q9H1X3 360 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 CBX8Q9HC52 389 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 RAVER2Q9HCJ3 691 aaKnown RBP11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 ZNF214Q9UL59 606 aaPredicted RBP11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 SLC45A1Q9Y2W3 748 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 OTOFQ9HC10 1997 aa11.61□□□□□ -0.55
SNORD88C-201ENST00000408061 B4DLN1 442 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 SOCS7O14512 581 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 SLC25A27O95847 323 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 OSBPP22059 807 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 HOXA13P31271 388 aaPredicted RBP11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 STAT3P40763 770 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 SNAPC2Q13487 334 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 PRKG1Q13976 671 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 HS1BP3Q53T59 392 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 PRR16Q569H4 304 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 RNF207Q6ZRF8 634 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 SV2BQ7L1I2 683 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 RNF214Q8ND24 703 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 C7orf25Q9BPX7 421 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 ACAD9Q9H845 621 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 RNF146Q9NTX7 359 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 AGTPBP1Q9UPW5 1226 aa11.6□□□□□ -0.55
SNORD88C-201ENST00000408061 IGLV3-22A0A075B6J6 115 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 A0A087X0B3 334 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 RPA1P27694 616 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 IRX3P78415 501 aaPredicted RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 KARSQ15046 597 aaKnown RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 SARM1Q6SZW1 724 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 PLA2G4DQ86XP0 818 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 C2orf69Q8N8R5 385 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 SYTL5Q8TDW5 730 aaPredicted RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 SLC5A5Q92911 643 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 LENG9Q96B70 501 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 IWS1Q96ST2 819 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 P2RX7Q99572 595 aaKnown RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 MXRA8Q9BRK3 442 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 MMTAG2Q9BU76 263 aaKnown RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 POLR3CQ9BUI4 534 aaPredicted RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 BMP2KQ9NSY1 1161 aaPredicted RBP11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 TBC1D22BQ9NU19 505 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 PFASO15067 1338 aa11.59□□□□□ -0.55
SNORD88C-201ENST00000408061 COL11A1P12107 1806 aaPredicted RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 FAM86B1E9PN63 330 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 FAM86B2P0C5J1 330 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 PLCG1P19174 1290 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 AFMP43652 599 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 RPS6P62753 249 aaKnown RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 PSMD2Q13200 908 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 DHX8Q14562 1220 aaKnown RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 TMEM119Q4V9L6 283 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 NAALADL2Q58DX5 795 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 SNRNP48Q6IEG0 339 aaKnown RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 DNERQ8NFT8 737 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 ENOX1Q8TC92 643 aaKnown RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 NSUN6Q8TEA1 469 aaKnown RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 SNX29Q8TEQ0 813 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 TBC1D5Q92609 795 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 LARP4BQ92615 738 aaKnown RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 OTUD5Q96G74 571 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 CDHR1Q96JP9 859 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 MPHOSPH6Q99547 160 aaKnown RBP11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 TUFT1Q9NNX1 390 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 MAN1B1Q9UKM7 699 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 UBIAD1Q9Y5Z9 338 aa11.58□□□□□ -0.56
SNORD88C-201ENST00000408061 GOLGB1Q14789 3259 aaKnown RBP11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 NFIBO00712 420 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 MSH4O15457 936 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 PSMD10O75832 226 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 RHOBTB3O94955 611 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 RPN1P04843 607 aaKnown RBP11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 TPM3P06753 285 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 ZBTB48P10074 688 aaPredicted RBP11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 CETPP11597 493 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 CCT6AP40227 531 aaKnown RBP11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 GTF2A2P52657 109 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 MYL5Q02045 173 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 GRB10Q13322 594 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 STIM1Q13586 685 aa11.57□□□□□ -0.56
SNORD88C-201ENST00000408061 DPCR1Q3MIW9 517 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms