RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 HIP1O00291 1037 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 PARNO95453 639 aaKnown RBP24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 DGKDQ16760 1214 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 CNKSR3Q6P9H4 555 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 MCF2L2Q86YR7 1114 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 ESR2Q92731 530 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 TAAR1Q96RJ0 339 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 LRFN3Q9BTN0 628 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 IL25Q9H293 177 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 RNF41Q9H4P4 317 aaPredicted RBP24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 GBF1Q92538 1859 aa24.61■■□□□ 1.53
RHBDD3-202ENST00000406335 LCHNA4D1U4 455 aa24.6■■□□□ 1.53
RHBDD3-202ENST00000406335 IKBKEQ14164 716 aa24.6■■□□□ 1.53
RHBDD3-202ENST00000406335 ARHGEF16Q5VV41 709 aa24.6■■□□□ 1.53
RHBDD3-202ENST00000406335 FAM117BQ6P1L5 589 aa24.6■■□□□ 1.53
RHBDD3-202ENST00000406335 TBC1D10CQ8IV04 446 aa24.6■■□□□ 1.53
RHBDD3-202ENST00000406335 GDPD5Q8WTR4 605 aa24.6■■□□□ 1.53
RHBDD3-202ENST00000406335 CPVLQ9H3G5 476 aa24.6■■□□□ 1.53
RHBDD3-202ENST00000406335 PCP11498 1178 aaKnown RBP24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 DEFB103AP81534 67 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 CDC37Q16543 378 aaPredicted RBP24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 CCDC62Q6P9F0 684 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 SPRED2Q7Z698 418 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 TBC1D5Q92609 795 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 RMDN3Q96TC7 470 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 RAD9AQ99638 391 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 KATNAL1Q9BW62 490 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 KAT14Q9H8E8 782 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 ABCB11O95342 1321 aa24.59■■□□□ 1.53
RHBDD3-202ENST00000406335 ABHD14A-ACY1A0A1B0GW23 586 aa24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 CKBP12277 381 aa24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 SESTD1Q86VW0 696 aa24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 SYTL5Q8TDW5 730 aaPredicted RBP24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 TGS1Q96RS0 853 aaKnown RBP24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 IWS1Q96ST2 819 aa24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 VAT1LQ9HCJ6 419 aa24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 LMCD1Q9NZU5 365 aa24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 HDAC6Q9UBN7 1215 aa24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 MYH6P13533 1939 aa24.58■■□□□ 1.53
RHBDD3-202ENST00000406335 TCF20Q9UGU0 1960 aaKnown RBP24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 ZNF213O14771 459 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 LPXNO60711 386 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 SNHG28P0DPA3 235 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 PSEN2P49810 448 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 ARHGAP1Q07960 439 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 CCDC178Q5BJE1 867 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 IQCA1Q86XH1 822 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 DHX37Q8IY37 1157 aaKnown RBP24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 GTF2IRD1Q9UHL9 959 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 MRPL11Q9Y3B7 192 aaKnown RBP24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 MRVI1Q9Y6F6 885 aa24.57■■□□□ 1.52
RHBDD3-202ENST00000406335 EFCAB14O75071 495 aa24.56■■□□□ 1.52
RHBDD3-202ENST00000406335 EIF2AK2P19525 551 aaKnown RBP24.56■■□□□ 1.52
RHBDD3-202ENST00000406335 DGKHQ86XP1 1220 aa24.56■■□□□ 1.52
RHBDD3-202ENST00000406335 KAT2BQ92831 832 aa24.56■■□□□ 1.52
RHBDD3-202ENST00000406335 NBNO60934 754 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 GJB5O95377 273 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 LAMC2Q13753 1193 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 MFSD10Q14728 455 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 KIAA0753Q2KHM9 967 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 FBXO11Q86XK2 927 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 ADGRF4Q8IZF3 695 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 PNMA1Q8ND90 353 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 DHX38Q92620 1227 aaKnown RBP24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 DSCC1Q9BVC3 393 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 MAF1Q9H063 256 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 SUGCTQ9HAC7 445 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 NEDD4P46934 1319 aa24.55■■□□□ 1.52
RHBDD3-202ENST00000406335 XIRP2A4UGR9 3374 aa24.54■■□□□ 1.52
RHBDD3-202ENST00000406335 EIF3JO75822 258 aaKnown RBP24.54■■□□□ 1.52
RHBDD3-202ENST00000406335 CFBP00751 764 aa24.54■■□□□ 1.52
RHBDD3-202ENST00000406335 PTK7Q13308 1070 aa24.54■■□□□ 1.52
RHBDD3-202ENST00000406335 GPNMBQ14956 572 aa24.54■■□□□ 1.52
RHBDD3-202ENST00000406335 DDX41Q9UJV9 622 aaKnown RBP24.54■■□□□ 1.52
RHBDD3-202ENST00000406335 CHD7Q9P2D1 2997 aa24.54■■□□□ 1.52
RHBDD3-202ENST00000406335 FAM86C2PA6NEL3 165 aa24.53■■□□□ 1.52
RHBDD3-202ENST00000406335 CXCL10P02778 98 aa24.53■■□□□ 1.52
RHBDD3-202ENST00000406335 ZNF286BP0CG31 522 aa24.53■■□□□ 1.52
RHBDD3-202ENST00000406335 COL20A1Q9P218 1284 aa24.53■■□□□ 1.52
RHBDD3-202ENST00000406335 SCN5AQ14524 2016 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 LINC01553A4QN01 128 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 SORBS3O60504 671 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 KDM4AO75164 1064 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 AMHP03971 560 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 MYCLP12524 364 aaPredicted RBP24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 CHMLP26374 656 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 SSTR3P32745 418 aaPredicted RBP24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 ERVK-21P61565 698 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 ZNF618Q5T7W0 954 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 CTAGE1Q96RT6 745 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 UBE2ZQ9H832 354 aaPredicted RBP24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 INSL6Q9Y581 213 aa24.52■■□□□ 1.52
RHBDD3-202ENST00000406335 LCTP09848 1927 aa24.51■■□□□ 1.51
RHBDD3-202ENST00000406335 NR3C2P08235 984 aa24.51■■□□□ 1.51
RHBDD3-202ENST00000406335 PARP1P09874 1014 aaKnown RBP24.51■■□□□ 1.51
RHBDD3-202ENST00000406335 KCNA5P22460 613 aa24.51■■□□□ 1.51
RHBDD3-202ENST00000406335 QRICH1Q2TAL8 776 aa24.51■■□□□ 1.51
RHBDD3-202ENST00000406335 ASPRV1Q53RT3 343 aa24.51■■□□□ 1.51
RHBDD3-202ENST00000406335 SKAP1Q86WV1 359 aa24.51■■□□□ 1.51
RHBDD3-202ENST00000406335 MYOCDQ8IZQ8 938 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms