RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 PNKPQ96T60 521 aa25.68■■□□□ 1.7
RABGGTA-202ENST00000399409 PSTPIP2Q9H939 334 aa25.68■■□□□ 1.7
RABGGTA-202ENST00000399409 SIK3Q9Y2K2 1263 aa25.68■■□□□ 1.7
RABGGTA-202ENST00000399409 SAR1BQ9Y6B6 198 aa25.68■■□□□ 1.7
RABGGTA-202ENST00000399409 KDM3AQ9Y4C1 1321 aa25.68■■□□□ 1.7
RABGGTA-202ENST00000399409 NPR1P16066 1061 aa25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 HYIQ5T013 277 aa25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 TTBK2Q6IQ55 1244 aa25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 NT5C3AQ9H0P0 336 aa25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 ANO9A1A5B4 782 aa25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 MARCH6O60337 910 aa25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 PURBQ96QR8 312 aaKnown RBP25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 PLAGL2Q9UPG8 496 aa25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 ATF5Q9Y2D1 282 aaPredicted RBP25.67■■□□□ 1.7
RABGGTA-202ENST00000399409 IDEP14735 1019 aa25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 OAS2P29728 719 aaKnown RBP25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 VAV2P52735 878 aa25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 CKAP4Q07065 602 aaKnown RBP25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 SPA17Q15506 151 aa25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 HAS1Q92839 578 aa25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 CCDC42Q96M95 316 aa25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 NUDT12Q9BQG2 462 aa25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 MPHOSPH10O00566 681 aaKnown RBP25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 GPS2Q13227 327 aa25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 EDEM3Q9BZQ6 932 aa25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 BMP2KQ9NSY1 1161 aaPredicted RBP25.66■■□□□ 1.7
RABGGTA-202ENST00000399409 USP17L10C9JJH3 530 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 RHOXF2BP0C7M4 288 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 ALDH1B1P30837 517 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 KIF5AQ12840 1032 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 ARHGAP27Q6ZUM4 889 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 RHOXF2Q9BQY4 288 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 PCDHA12Q9UN75 941 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 SCNN1DP51172 638 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 NCAPH2Q6IBW4 605 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 APOBEC3HQ6NTF7 200 aaKnown RBP25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 WDR93Q6P2C0 686 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 LRRC55Q6ZSA7 311 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 KCNK18Q7Z418 384 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 MYOCDQ8IZQ8 938 aa25.65■■□□□ 1.7
RABGGTA-202ENST00000399409 ANKRD31Q8N7Z5 1873 aa25.64■■□□□ 1.7
RABGGTA-202ENST00000399409 ATP1A1P05023 1023 aaKnown RBP25.64■■□□□ 1.7
RABGGTA-202ENST00000399409 DCAF4Q8WV16 495 aa25.64■■□□□ 1.7
RABGGTA-202ENST00000399409 TMX4Q9H1E5 349 aaPredicted RBP25.64■■□□□ 1.7
RABGGTA-202ENST00000399409 G3V3G9 751 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 USO1O60763 962 aaKnown RBP25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 MCM3P25205 808 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 SLC16A2P36021 539 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 ATP2B2Q01814 1243 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 DCAF8Q5TAQ9 597 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 DNAJC19Q96DA6 116 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 L1RE1Q9UN81 338 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 POLR3GO15318 223 aaPredicted RBP25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 TFRCP02786 760 aaKnown RBP25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 CYP2C19P33261 490 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 USP11P51784 963 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 DOK7Q18PE1 504 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 KCTD1Q719H9 257 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 MKL1Q969V6 931 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 MRIQ9BWK5 157 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 LACRTQ9GZZ8 138 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 ABCB6Q9NP58 842 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 MYH4Q9Y623 1939 aa25.63■■□□□ 1.69
RABGGTA-202ENST00000399409 EIF3JO75822 258 aaKnown RBP25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 COASYQ13057 564 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 MCTP2Q6DN12 878 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 NOA1Q8NC60 698 aaKnown RBP25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 DHX36Q9H2U1 1008 aaKnown RBP25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 RCCD1A6NED2 376 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 ENC1O14682 589 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 LCA5LO95447 670 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 VSNL1P62760 191 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 NLGN1Q8N2Q7 840 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 SECISBP2LQ93073 1101 aaKnown RBP25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 MXD3Q9BW11 206 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 PANK4Q9NVE7 773 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 NYAP2Q9P242 653 aa25.62■■□□□ 1.69
RABGGTA-202ENST00000399409 FKBP3Q00688 224 aaKnown RBP25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 ECM1Q16610 540 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 ZDHHC15Q96MV8 337 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 MMRN2Q9H8L6 949 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 HDAC6Q9UBN7 1215 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 CYP3A7-CYP3A51PA0A087WV96 503 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 CYP3A7P24462 503 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 CRKP46108 304 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 USP14P54578 494 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 ZCWPW2Q504Y3 356 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 FAM26FQ5R3K3 315 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 TAF3Q5VWG9 929 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 MOXD1Q6UVY6 613 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 CCDC65Q8IXS2 484 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 CEP63Q96MT8 703 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 TFR2Q9UP52 801 aa25.61■■□□□ 1.69
RABGGTA-202ENST00000399409 MYH7BA7E2Y1 1941 aa25.6■■□□□ 1.69
RABGGTA-202ENST00000399409 CCDC66A2RUB6 948 aa25.6■■□□□ 1.69
RABGGTA-202ENST00000399409 NKRFO15226 690 aaKnown RBP eCLIP25.6■■□□□ 1.69
RABGGTA-202ENST00000399409 C2CD5Q86YS7 1000 aa25.6■■□□□ 1.69
RABGGTA-202ENST00000399409 TXLNBQ8N3L3 684 aa25.6■■□□□ 1.69
RABGGTA-202ENST00000399409 TRIM58Q8NG06 486 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms