RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 TTI2Q6NXR4 508 aa28.81■■■□□ 2.2
SHARPIN-202ENST00000398712 TMEM139Q8IV31 216 aa28.81■■■□□ 2.2
SHARPIN-202ENST00000398712 P2RX5Q93086 422 aa28.81■■■□□ 2.2
SHARPIN-202ENST00000398712 PPP1R13BQ96KQ4 1090 aa28.81■■■□□ 2.2
SHARPIN-202ENST00000398712 P2RX7Q99572 595 aaKnown RBP28.81■■■□□ 2.2
SHARPIN-202ENST00000398712 FEM1BQ9UK73 627 aa28.81■■■□□ 2.2
SHARPIN-202ENST00000398712 CD2APQ9Y5K6 639 aa28.81■■■□□ 2.2
SHARPIN-202ENST00000398712 CIITAP33076 1130 aa28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 STK4Q13043 487 aa28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 RASA3Q14644 834 aa28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 MAGEC2Q9UBF1 373 aaPredicted RBP28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 GTF2F1P35269 517 aaKnown RBP eCLIP28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 PMS1P54277 932 aaKnown RBP28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 ADKP55263 362 aaKnown RBP28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 GJA10Q969M2 543 aa28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 PANX2Q96RD6 677 aa28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 TAB2Q9NYJ8 693 aa28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.8■■■□□ 2.27e-7■□□□□ 9.8
SHARPIN-202ENST00000398712 STK24Q9Y6E0 443 aa28.8■■■□□ 2.2
SHARPIN-202ENST00000398712 SHTN1A0MZ66 631 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 TUBB4AP04350 444 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 CYP3A4P08684 503 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 TPM1P09493 284 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 PRR16Q569H4 304 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 ETNPPLQ8TBG4 499 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 KIFC2Q96AC6 838 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 FAM20AQ96MK3 541 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 VPS16Q9H269 839 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 BCS1LQ9Y276 419 aa28.79■■■□□ 2.2
SHARPIN-202ENST00000398712 FCER1AP12319 257 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 PSMD2Q13200 908 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 ZYXQ15942 572 aaKnown RBP28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 HAUS3Q68CZ6 603 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 KCNK18Q7Z418 384 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 IRF2BP1Q8IU81 584 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 SRRTQ9BXP5 876 aaKnown RBP28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 HOXA13P31271 388 aaPredicted RBP28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 TRIM14Q14142 442 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 FAM114A1Q8IWE2 563 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 CSGALNACT2Q8N6G5 542 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 GINM1Q9NU53 330 aa28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 MRPL11Q9Y3B7 192 aaKnown RBP28.78■■■□□ 2.2
SHARPIN-202ENST00000398712 ECM1Q16610 540 aa28.77■■■□□ 2.2
SHARPIN-202ENST00000398712 CCDC174Q6PII3 467 aa28.77■■■□□ 2.2
SHARPIN-202ENST00000398712 DYMQ7RTS9 669 aa28.77■■■□□ 2.2
SHARPIN-202ENST00000398712 CREBRFQ8IUR6 639 aa28.77■■■□□ 2.2
SHARPIN-202ENST00000398712 KIAA0895Q8NCT3 520 aa28.77■■■□□ 2.2
SHARPIN-202ENST00000398712 ERMNQ8TAM6 284 aa28.77■■■□□ 2.2
SHARPIN-202ENST00000398712 DDX12PQ92771 950 aa28.77■■■□□ 2.2
SHARPIN-202ENST00000398712 BMP2KQ9NSY1 1161 aaPredicted RBP28.77■■■□□ 2.2
SHARPIN-202ENST00000398712 PHF20L1A8MW92 1017 aa28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 RIOK3O14730 519 aaKnown RBP28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 ZSCAN12O43309 604 aa28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 TAL1P17542 331 aaPredicted RBP28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 RBL2Q08999 1139 aa28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 CNGA4Q8IV77 575 aa28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 LENG9Q96B70 501 aa28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 CCDC51Q96ER9 411 aa28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 FEZ1Q99689 392 aa28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 DUSP9Q99956 384 aaKnown RBP28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 NAA15Q9BXJ9 866 aaKnown RBP28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 EHMT1Q9H9B1 1298 aa28.76■■■□□ 2.19
SHARPIN-202ENST00000398712 GCOM1H8Y6P7 765 aaPredicted RBP28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 POLR2MP0CAP2 368 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 ZNF76P36508 570 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 SLC39A2Q9NP94 309 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 ABCB11O95342 1321 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 FAM86B1E9PN63 330 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 FAM86B2P0C5J1 330 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 ANKRD40Q6AI12 368 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 ZNF592Q92610 1267 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 TEPSINQ96N21 525 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 KIAA1024Q9UPX6 916 aa28.75■■■□□ 2.19
SHARPIN-202ENST00000398712 CFBP00751 764 aa28.74■■■□□ 2.19
SHARPIN-202ENST00000398712 IDEP14735 1019 aa28.74■■■□□ 2.19
SHARPIN-202ENST00000398712 GMPSP49915 693 aaPredicted RBP28.74■■■□□ 2.19
SHARPIN-202ENST00000398712 MICALL2Q8IY33 904 aa28.74■■■□□ 2.19
SHARPIN-202ENST00000398712 GUF1Q8N442 669 aaKnown RBP28.74■■■□□ 2.19
SHARPIN-202ENST00000398712 ZNF341Q9BYN7 854 aa28.74■■■□□ 2.19
SHARPIN-202ENST00000398712 GLIS2Q9BZE0 524 aaPredicted RBP28.74■■■□□ 2.19
SHARPIN-202ENST00000398712 LGALS16A8MUM7 142 aa28.73■■■□□ 2.19
SHARPIN-202ENST00000398712 MFAP3LO75121 409 aa28.73■■■□□ 2.19
SHARPIN-202ENST00000398712 UBXN1Q04323 297 aa28.73■■■□□ 2.19
SHARPIN-202ENST00000398712 SPIRE1Q08AE8 756 aa28.73■■■□□ 2.19
SHARPIN-202ENST00000398712 KIF18AQ8NI77 898 aa28.73■■■□□ 2.19
SHARPIN-202ENST00000398712 EHHADHQ08426 723 aa28.73■■■□□ 2.19
SHARPIN-202ENST00000398712 CENPPQ6IPU0 288 aa28.73■■■□□ 2.19
SHARPIN-202ENST00000398712 SMCHD1A6NHR9 2005 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 POTEB3A0JP26 581 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 GOLGA6L9A6NEM1 432 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 POTECB2RU33 542 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 FZD9O00144 591 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 PLA2G4BP0C869 781 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 STAT3P40763 770 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 POTEBQ6S5H4 581 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 LPAR1Q92633 364 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 DNAJC19Q96DA6 116 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 UIMC1Q96RL1 719 aa28.72■■■□□ 2.19
SHARPIN-202ENST00000398712 SGIP1Q9BQI5 828 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms