RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 DDX19BQ9UMR2 479 aa9.97□□□□□ -0.81
SCFD1-202ENST00000396629 TSPY2A6NKD2 308 aa9.96□□□□□ -0.81
SCFD1-202ENST00000396629 NMT2O60551 498 aa9.96□□□□□ -0.81
SCFD1-202ENST00000396629 MMP3P08254 477 aa9.96□□□□□ -0.81
SCFD1-202ENST00000396629 SLC16A2P36021 539 aa9.96□□□□□ -0.81
SCFD1-202ENST00000396629 RPS6P62753 249 aaKnown RBP9.96□□□□□ -0.81
SCFD1-202ENST00000396629 HTRA4P83105 476 aaPredicted RBP9.96□□□□□ -0.81
SCFD1-202ENST00000396629 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.81
SCFD1-202ENST00000396629 CCDC96Q2M329 555 aa9.96□□□□□ -0.81
SCFD1-202ENST00000396629 TRIM71Q2Q1W2 868 aaKnown RBP9.96□□□□□ -0.81
SCFD1-202ENST00000396629 SP7Q8TDD2 431 aaPredicted RBP9.96□□□□□ -0.81
SCFD1-202ENST00000396629 NAPBQ9H115 298 aa9.96□□□□□ -0.81
SCFD1-202ENST00000396629 GTF2IRD1Q9UHL9 959 aa9.96□□□□□ -0.81
SCFD1-202ENST00000396629 INSL6Q9Y581 213 aa9.96□□□□□ -0.81
SCFD1-202ENST00000396629 B4DLN1 442 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 MRPL12P52815 198 aaKnown RBP9.95□□□□□ -0.82
SCFD1-202ENST00000396629 ZP2Q05996 745 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 ARHGAP1Q07960 439 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 PTK7Q13308 1070 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 AFG1LQ8WV93 481 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 PABPC5Q96DU9 382 aaKnown RBP9.95□□□□□ -0.82
SCFD1-202ENST00000396629 SAMD11Q96NU1 681 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 CRBNQ96SW2 442 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 SEC62Q99442 399 aaKnown RBP9.95□□□□□ -0.82
SCFD1-202ENST00000396629 FAM50BQ9Y247 325 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 COL4A6Q14031 1691 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 H3BQ06 376 aaPredicted RBP9.95□□□□□ -0.82
SCFD1-202ENST00000396629 GH1P01241 217 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 CHMP4BP1P59074 171 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 MBTPS1Q14703 1052 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 PTPROQ16827 1216 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 TIGD5Q53EQ6 642 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 FAM117BQ6P1L5 589 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.95□□□□□ -0.824e-10■■■■□ 25.5
SCFD1-202ENST00000396629 RGS22Q8NE09 1264 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 INCENPQ9NQS7 918 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 HDAC6Q9UBN7 1215 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 MTMR7Q9Y216 660 aa9.95□□□□□ -0.82
SCFD1-202ENST00000396629 WDR19Q8NEZ3 1342 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 H3BNC9 293 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 LGR5O75473 907 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 CASTP20810 708 aaKnown RBP9.94□□□□□ -0.82
SCFD1-202ENST00000396629 CTDSPL2Q05D32 466 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 EPC2Q52LR7 807 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 ZNF618Q5T7W0 954 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 HFE2Q6ZVN8 426 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 ADHFE1Q8IWW8 467 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
SCFD1-202ENST00000396629 MAF1Q9H063 256 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 ANAPC4Q9UJX5 808 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 HAS3O00219 553 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 FOXP2O15409 715 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 FGRP09769 529 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 PSEN2P49810 448 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 LY6KQ17RY6 165 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 TCEAL5Q5H9L2 206 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 ZMYM1Q5SVZ6 1142 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 BANK1Q8NDB2 785 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 ANKS1AQ92625 1134 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 WNT8BQ93098 351 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 GPATCH3Q96I76 525 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 MFSD14AQ96MC6 490 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 CHMP4BQ9H444 224 aaKnown RBP9.94□□□□□ -0.82
SCFD1-202ENST00000396629 GPCPD1Q9NPB8 672 aa9.94□□□□□ -0.82
SCFD1-202ENST00000396629 FRMPD2Q68DX3 1309 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-202ENST00000396629 ORC4O43929 436 aa9.93□□□□□ -0.82
SCFD1-202ENST00000396629 AMHP03971 560 aa9.93□□□□□ -0.82
SCFD1-202ENST00000396629 TOP1P11387 765 aaKnown RBP9.93□□□□□ -0.82
SCFD1-202ENST00000396629 IRS1P35568 1242 aa9.93□□□□□ -0.82
SCFD1-202ENST00000396629 GPM6BQ13491 265 aa9.93□□□□□ -0.82
SCFD1-202ENST00000396629 DGKDQ16760 1214 aa9.93□□□□□ -0.82
SCFD1-202ENST00000396629 C7orf31Q8N865 590 aa9.93□□□□□ -0.82
SCFD1-202ENST00000396629 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-202ENST00000396629 TMEM47Q9BQJ4 181 aa9.93□□□□□ -0.82
SCFD1-202ENST00000396629 NSUN3Q9H649 340 aaKnown RBP9.93□□□□□ -0.82
SCFD1-202ENST00000396629 EMSYQ7Z589 1322 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
SCFD1-202ENST00000396629 LTBRP36941 435 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 MFSD10Q14728 455 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 HERC4Q5GLZ8 1057 aaPredicted RBP9.92□□□□□ -0.82
SCFD1-202ENST00000396629 TSHZ3Q63HK5 1081 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 DBF4BQ8NFT6 615 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 ALG1Q9BT22 464 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 KATNAL1Q9BW62 490 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 TCP11L1Q9NUJ3 509 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 MYH6P13533 1939 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 RBAK-RBAKDNI3L0D1 243 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 NCK2O43639 380 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 F2P00734 622 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 PDHBP11177 359 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 ZNF200P98182 395 aaPredicted RBP9.92□□□□□ -0.82
SCFD1-202ENST00000396629 ZNF543Q08ER8 600 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 CTC1Q2NKJ3 1217 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 PLEKHG4Q58EX7 1191 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 SEPT14Q6ZU15 432 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 BMP8AQ7Z5Y6 402 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 TMEM192Q8IY95 271 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 MYOCDQ8IZQ8 938 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 PHOX2BQ99453 314 aa9.92□□□□□ -0.82
SCFD1-202ENST00000396629 DDX41Q9UJV9 622 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms