RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TCP1P17987 556 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 CCNE1P24864 410 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SCNN1DP51172 638 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 LONRF3Q496Y0 759 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 MAATS1Q7Z4T9 603 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RNF10Q8N5U6 811 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RIT2Q99578 217 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 XPOTO43592 962 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 FXR2P51116 673 aaKnown RBP eCLIP3.73□□□□□ -1.812e-7■■■■□ 20.3
VPS13C-203ENST00000395896 BMS1Q14692 1282 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 PAXIP1Q6ZW49 1069 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TUFT1Q9NNX1 390 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 CNOT1A5YKK6 2376 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 PALM3A6NDB9 673 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 THAP12O43422 761 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GCNT3O95395 438 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GH2P01242 217 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 DOK7Q18PE1 504 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TKFCQ3LXA3 575 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SYDE2Q5VT97 1194 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SLC4A9Q96Q91 983 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 PHF20Q9BVI0 1012 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 MYPNQ86TC9 1320 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 NID2Q14112 1375 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 CEP250Q9BV73 2442 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 UNCXA6NJT0 531 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RPN1P04843 607 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 POLR2BP30876 1174 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SEC23AQ15436 765 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GBP6Q6ZN66 633 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 STOX1Q6ZVD7 989 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZBTB8OSQ8IWT0 167 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SH3RF3Q8TEJ3 882 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SLF1Q9BQI6 1058 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF577Q9BSK1 485 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ANO3Q9BYT9 981 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 EVPLQ92817 2033 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TBC1D12O60347 775 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TM4SF1P30408 202 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TNNT3P45378 269 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 NSMFQ6X4W1 530 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ADPGKQ9BRR6 497 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 STMN4Q9H169 189 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 NRBP2Q9NSY0 501 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RNF216Q9NWF9 866 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 CDK5RAP2Q96SN8 1893 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TPRP12270 2363 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ACTN4O43707 911 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TECP42680 631 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 FAM160B1Q5W0V3 765 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 PLA2G4DQ86XP0 818 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 PANX2Q96RD6 677 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TUBE1Q9UJT0 475 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ODF2LQ9ULJ1 636 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 LAMA4Q16363 1823 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 EXOC3O60645 756 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SLC26A2P50443 739 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 DYNLL1P63167 89 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ARHGAP4P98171 946 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 KYAT1Q16773 422 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RAB11FIP4Q86YS3 637 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 UBL4BQ8N7F7 174 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GABPB2Q8TAK5 448 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 MAIP1Q8WWC4 291 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GOLGA6L7A0A1B0GV03 622 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 PHACTR2O75167 634 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GPSM2P81274 684 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZBED6P86452 979 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ODR4Q5SWX8 454 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 LEKR1Q6ZMV7 388 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RBM43Q6ZSC3 357 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF280CQ8ND82 737 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ERO1AQ96HE7 468 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 INO80BQ9C086 356 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 THAP9Q9H5L6 903 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GOLGB1Q14789 3259 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GADD45BO75293 160 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 NR2F2P24468 414 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TAF3Q5VWG9 929 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ENOSF1Q7L5Y1 443 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TMX2Q9Y320 296 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZC3H4Q9UPT8 1303 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 GVINP1Q7Z2Y8 2422 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RAD17O75943 681 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SLC25A27O95847 323 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 MYZAPP0CAP1 466 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 HSPA6P17066 643 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 TNNC1P63316 161 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 SMYD5Q6GMV2 418 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 MIER3Q7Z3K6 550 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 NELFBQ8WX92 580 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 P2RX5Q93086 422 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RBSNQ9H1K0 784 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 HOMER3Q9NSC5 361 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 RASAL2Q9UJF2 1139 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZMYM2Q9UBW7 1377 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF189O75820 626 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 NOP2P46087 812 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZRSR2Q15696 482 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms