RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 HNRNPLLQ8WVV9 542 aaKnown RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 TEKT1Q969V4 418 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 IQCDQ96DY2 449 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 CAPZA3Q96KX2 299 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 LACRTQ9GZZ8 138 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 GBP3Q9H0R5 595 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 RNF216Q9NWF9 866 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-203ENST00000395667 PCDHA12Q9UN75 941 aa10.28□□□□□ -0.76
CDRT1-203ENST00000395667 A0A1W2PQJ5 194 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 VSNL1P62760 191 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 LRRC63Q05C16 580 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 MAN2A1Q16706 1144 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 FIGNQ5HY92 759 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 BEND6Q5SZJ8 279 aaPredicted RBP10.27□□□□□ -0.77
CDRT1-203ENST00000395667 CDC42EP5Q6NZY7 148 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 C2CD5Q86YS7 1000 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 CAGE1Q8TC20 777 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 ABCB6Q9NP58 842 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 RCCD1A6NED2 376 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 SRGAP2O75044 1071 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 SLURP2P0DP57 97 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 TMEM119Q4V9L6 283 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 CCDC84Q86UT8 332 aaPredicted RBP10.27□□□□□ -0.77
CDRT1-203ENST00000395667 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 ZBTB9Q96C00 473 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 MYO3BQ8WXR4 1341 aa10.27□□□□□ -0.77
CDRT1-203ENST00000395667 KLRG2A4D1S0 409 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USO1O60763 962 aaKnown RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 TRIM37O94972 964 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 TUBBP07437 444 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 PLEKP08567 350 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 GCFC2P16383 781 aaKnown RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 TCP10Q12799 353 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 NFIAQ12857 509 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 PSMD2Q13200 908 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 KRT26Q7Z3Y9 468 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 MYOCDQ8IZQ8 938 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 GLIS3Q8NEA6 775 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 HAS1Q92839 578 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 SECISBP2LQ93073 1101 aaKnown RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 UBXN6Q9BZV1 441 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 JADE2Q9NQC1 790 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 DUSP10Q9Y6W6 482 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 FOCADQ5VW36 1801 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L15C9J2P7 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L13C9JLJ4 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L11C9JVI0 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L18D6R9N7 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L22D6RA61 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L17D6RBQ6 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L19D6RCP7 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L20D6RJB6 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 EIF3JO75822 258 aaKnown RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 VAV2P52735 878 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 CKAP4Q07065 602 aaKnown RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L24Q0WX57 530 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 ECM1Q16610 540 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 USP17L6PQ6QN14 398 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 ZNF662Q6ZS27 426 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 RRAGAQ7L523 313 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 CACNA2D4Q7Z3S7 1137 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 TRIM34Q9BYJ4 488 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
CDRT1-203ENST00000395667 TSGA10Q9BZW7 698 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 TBC1D7Q9P0N9 293 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 EP400Q96L91 3159 aa10.26□□□□□ -0.77
CDRT1-203ENST00000395667 CCDC66A2RUB6 948 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 TRAF5O00463 557 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 MAP2K7O14733 419 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 EPHB6O15197 1021 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 AKR1B10O60218 316 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 SLC1A4P43007 532 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 CLK2P49760 499 aaKnown RBP10.25□□□□□ -0.77
CDRT1-203ENST00000395667 RBM5P52756 815 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDRT1-203ENST00000395667 CACNB3P54284 484 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 CDK17Q00537 523 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 COASYQ13057 564 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 CCDC40Q4G0X9 1142 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 FAM26FQ5R3K3 315 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 PAPD7Q5XG87 772 aaKnown RBP10.25□□□□□ -0.77
CDRT1-203ENST00000395667 NEK11Q8NG66 645 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 CCDC17Q96LX7 622 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 MMS19Q96T76 1030 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 NT5C3AQ9H0P0 336 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 SUGCTQ9HAC7 445 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 PDE11AQ9HCR9 933 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 PANK4Q9NVE7 773 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 PLAGL2Q9UPG8 496 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 KIAA1024Q9UPX6 916 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 SIK3Q9Y2K2 1263 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 PCDHA1Q9Y5I3 950 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 MYH7BA7E2Y1 1941 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 ONECUT3O60422 494 aaPredicted RBP10.25□□□□□ -0.77
CDRT1-203ENST00000395667 NPR1P16066 1061 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 QRICH1Q2TAL8 776 aa10.25□□□□□ -0.77
CDRT1-203ENST00000395667 APOBEC3HQ6NTF7 200 aaKnown RBP10.25□□□□□ -0.77
CDRT1-203ENST00000395667 HHIPL2Q6UWX4 724 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms