RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 RAB34Q9BZG1 259 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 PICK1Q9NRD5 415 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 EXOC1Q9NV70 894 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 TAB2Q9NYJ8 693 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 RGL1Q9NZL6 768 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 PSMC6P62333 389 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 PAK1Q13153 545 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 PLS1Q14651 629 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 BTNL9Q6UXG8 535 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 SV2BQ7L1I2 683 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 KIAA1524Q8TCG1 905 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 BCAS3Q9H6U6 928 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 SH2D4AQ9H788 454 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 EMILIN3Q9NT22 766 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 GCOM1H8Y6P7 765 aaPredicted RBP22.8■■□□□ 1.24
PRKCD-202ENST00000394729 ZBTB39O15060 712 aa22.8■■□□□ 1.24
PRKCD-202ENST00000394729 KLRC4O43908 158 aa22.8■■□□□ 1.24
PRKCD-202ENST00000394729 POLR2MP0CAP2 368 aa22.8■■□□□ 1.24
PRKCD-202ENST00000394729 MUM1L1Q5H9M0 696 aa22.8■■□□□ 1.24
PRKCD-202ENST00000394729 SH2D3AQ9BRG2 576 aa22.8■■□□□ 1.24
PRKCD-202ENST00000394729 NKRFO15226 690 aaKnown RBP eCLIP22.8■■□□□ 1.24
PRKCD-202ENST00000394729 PABPC4Q13310 644 aaKnown RBP eCLIP22.8■■□□□ 1.249e-8■■■■■ 59.6
PRKCD-202ENST00000394729 ZNF658Q5TYW1 1059 aaPredicted RBP22.8■■□□□ 1.24
PRKCD-202ENST00000394729 ATG4CQ96DT6 458 aa22.8■■□□□ 1.24
PRKCD-202ENST00000394729 MSH4O15457 936 aa22.79■■□□□ 1.24
PRKCD-202ENST00000394729 ZNF500O60304 480 aaPredicted RBP22.79■■□□□ 1.24
PRKCD-202ENST00000394729 MED24O75448 989 aa22.79■■□□□ 1.24
PRKCD-202ENST00000394729 ZNF592Q92610 1267 aa22.79■■□□□ 1.24
PRKCD-202ENST00000394729 DDX12PQ92771 950 aa22.79■■□□□ 1.24
PRKCD-202ENST00000394729 TRIM47Q96LD4 638 aa22.79■■□□□ 1.24
PRKCD-202ENST00000394729 SLF1Q9BQI6 1058 aa22.79■■□□□ 1.24
PRKCD-202ENST00000394729 FXR2P51116 673 aaKnown RBP eCLIP22.78■■□□□ 1.24
PRKCD-202ENST00000394729 COL20A1Q9P218 1284 aa22.78■■□□□ 1.24
PRKCD-202ENST00000394729 CTNND1O60716 968 aaKnown RBP22.78■■□□□ 1.24
PRKCD-202ENST00000394729 EIF2AK2P19525 551 aaKnown RBP22.78■■□□□ 1.24
PRKCD-202ENST00000394729 SFPQP23246 707 aaKnown RBP eCLIP22.78■■□□□ 1.24
PRKCD-202ENST00000394729 SPATA1Q5VX52 437 aa22.78■■□□□ 1.24
PRKCD-202ENST00000394729 IL31RAQ8NI17 732 aa22.78■■□□□ 1.24
PRKCD-202ENST00000394729 PIGOQ8TEQ8 1089 aa22.78■■□□□ 1.24
PRKCD-202ENST00000394729 WDR18Q9BV38 432 aa22.78■■□□□ 1.24
PRKCD-202ENST00000394729 CTTNQ14247 550 aaKnown RBP22.77■■□□□ 1.24
PRKCD-202ENST00000394729 ELOA2Q8IYF1 753 aaPredicted RBP22.77■■□□□ 1.24
PRKCD-202ENST00000394729 LENG9Q96B70 501 aa22.77■■□□□ 1.24
PRKCD-202ENST00000394729 RANBP17Q9H2T7 1088 aaKnown RBP22.77■■□□□ 1.24
PRKCD-202ENST00000394729 BMP2KQ9NSY1 1161 aaPredicted RBP22.77■■□□□ 1.24
PRKCD-202ENST00000394729 FEM1BQ9UK73 627 aa22.77■■□□□ 1.24
PRKCD-202ENST00000394729 RIPK3Q9Y572 518 aa22.77■■□□□ 1.24
PRKCD-202ENST00000394729 MORC2Q9Y6X9 1032 aaPredicted RBP22.77■■□□□ 1.24
PRKCD-202ENST00000394729 ZNF18P17022 549 aa22.77■■□□□ 1.24
PRKCD-202ENST00000394729 C9orf131Q5VYM1 1079 aa22.77■■□□□ 1.24
PRKCD-202ENST00000394729 PRPF38AQ8NAV1 312 aaKnown RBP22.77■■□□□ 1.24
PRKCD-202ENST00000394729 EML1O00423 815 aa22.77■■□□□ 1.23
PRKCD-202ENST00000394729 KRT18P05783 430 aaKnown RBP22.77■■□□□ 1.23
PRKCD-202ENST00000394729 PTPRAP18433 802 aa22.77■■□□□ 1.23
PRKCD-202ENST00000394729 CEP135Q66GS9 1140 aa22.77■■□□□ 1.23
PRKCD-202ENST00000394729 GPC2Q8N158 579 aa22.77■■□□□ 1.23
PRKCD-202ENST00000394729 PYM1Q9BRP8 204 aaKnown RBP22.77■■□□□ 1.23
PRKCD-202ENST00000394729 SRRTQ9BXP5 876 aaKnown RBP22.77■■□□□ 1.23
PRKCD-202ENST00000394729 FGFBP2Q9BYJ0 223 aa22.77■■□□□ 1.23
PRKCD-202ENST00000394729 ZNF536O15090 1300 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 MYCLP12524 364 aaPredicted RBP22.76■■□□□ 1.23
PRKCD-202ENST00000394729 ERCC5P28715 1186 aaPredicted RBP22.76■■□□□ 1.23
PRKCD-202ENST00000394729 AP3B2Q13367 1082 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 TTLL12Q14166 644 aaPredicted RBP22.76■■□□□ 1.23
PRKCD-202ENST00000394729 EAPPQ56P03 285 aaPredicted RBP22.76■■□□□ 1.23
PRKCD-202ENST00000394729 BRCA2P51587 3418 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 ARP10275 920 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 CDC25BP30305 580 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 SREBF1P36956 1147 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 USP11P51784 963 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 NELFCDQ8IXH7 590 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 RAD54LQ92698 747 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 RMND1Q9NWS8 449 aa22.76■■□□□ 1.23
PRKCD-202ENST00000394729 COL2A1P02458 1487 aaPredicted RBP22.75■■□□□ 1.23
PRKCD-202ENST00000394729 SFI1A8K8P3 1242 aa22.75■■□□□ 1.23
PRKCD-202ENST00000394729 CATSPER3Q86XQ3 398 aa22.75■■□□□ 1.23
PRKCD-202ENST00000394729 ETNPPLQ8TBG4 499 aa22.75■■□□□ 1.23
PRKCD-202ENST00000394729 KCNMB3Q9NPA1 279 aa22.75■■□□□ 1.23
PRKCD-202ENST00000394729 N4BP3O15049 544 aa22.75■■□□□ 1.23
PRKCD-202ENST00000394729 SP4Q02446 784 aa22.75■■□□□ 1.23
PRKCD-202ENST00000394729 TPH2Q8IWU9 490 aa22.75■■□□□ 1.23
PRKCD-202ENST00000394729 KIAA0895Q8NCT3 520 aa22.75■■□□□ 1.23
PRKCD-202ENST00000394729 LTBP3Q9NS15 1303 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 GCFC2P16383 781 aaKnown RBP22.74■■□□□ 1.23
PRKCD-202ENST00000394729 CCZ1BP86790 482 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 CCZ1P86791 482 aaPredicted RBP22.74■■□□□ 1.23
PRKCD-202ENST00000394729 DCAF15Q66K64 600 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 MAEAQ7L5Y9 396 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 SCYL3Q8IZE3 742 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 FAM177A1Q8N128 213 aaPredicted RBP22.74■■□□□ 1.23
PRKCD-202ENST00000394729 TMX1Q9H3N1 280 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 MRPL11Q9Y3B7 192 aaKnown RBP22.74■■□□□ 1.23
PRKCD-202ENST00000394729 ECM2O94769 699 aaPredicted RBP22.74■■□□□ 1.23
PRKCD-202ENST00000394729 ADSSL1Q8N142 457 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 ZNF280CQ8ND82 737 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 ARFGEF1Q9Y6D6 1849 aa22.74■■□□□ 1.23
PRKCD-202ENST00000394729 KRT31Q15323 416 aa22.73■■□□□ 1.23
PRKCD-202ENST00000394729 FAM160B2Q86V87 743 aa22.73■■□□□ 1.23
PRKCD-202ENST00000394729 GPBP1Q86WP2 473 aa22.73■■□□□ 1.23
PRKCD-202ENST00000394729 WDR11Q9BZH6 1224 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms