RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 TMX2Q9Y320 296 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 A0A087WWV3 80 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 PTMAP06454 111 aaKnown RBP7.88□□□□□ -1.15
RTN4-205ENST00000394609 TAL1P17542 331 aaPredicted RBP7.88□□□□□ -1.15
RTN4-205ENST00000394609 SYKP43405 635 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 CDC37Q16543 378 aaPredicted RBP7.88□□□□□ -1.15
RTN4-205ENST00000394609 QRICH1Q2TAL8 776 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 FAM83BQ5T0W9 1011 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 DLK2Q6UY11 383 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 USP49Q70CQ1 688 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 CREBRFQ8IUR6 639 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 REXO1Q8N1G1 1221 aaKnown RBP7.88□□□□□ -1.15
RTN4-205ENST00000394609 DAGLBQ8NCG7 672 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 MTMR8Q96EF0 704 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 FUCA2Q9BTY2 467 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 CSRNP2Q9H175 543 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 USP25Q9UHP3 1055 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 KCNH3Q9ULD8 1083 aa7.88□□□□□ -1.15
RTN4-205ENST00000394609 SRPRBQ9Y5M8 271 aaKnown RBP7.88□□□□□ -1.15
RTN4-205ENST00000394609 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.88□□□□□ -1.158e-9■■■□□ 15.2
RTN4-205ENST00000394609 VWA3AA6NCI4 1184 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 ASNSP08243 561 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 CCDC192P0DO97 292 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 INPP5BP32019 993 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 TRAPPC10P48553 1259 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 ADCY7P51828 1080 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 TYRO3Q06418 890 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 NOLC1Q14978 699 aaKnown RBP eCLIP7.87□□□□□ -1.158e-8■□□□□ 10
RTN4-205ENST00000394609 UBE2SQ16763 222 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 SYDE2Q5VT97 1194 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 RBM43Q6ZSC3 357 aaKnown RBP7.87□□□□□ -1.15
RTN4-205ENST00000394609 PDILTQ8N807 584 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 ANKRD7Q92527 254 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 CCDC102AQ96A19 550 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 ZNF341Q9BYN7 854 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 GOPCQ9HD26 462 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 HPSEQ9Y251 543 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 PCDHA1Q9Y5I3 950 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 ESYT2A0FGR8 921 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 J3QL48 77 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 CTIFO43310 598 aaKnown RBP7.87□□□□□ -1.15
RTN4-205ENST00000394609 CCNT1O60563 726 aaKnown RBP7.87□□□□□ -1.15
RTN4-205ENST00000394609 ATP2C1P98194 919 aaPredicted RBP7.87□□□□□ -1.15
RTN4-205ENST00000394609 GABPB1Q06547 395 aaPredicted RBP7.87□□□□□ -1.15
RTN4-205ENST00000394609 DGKZQ13574 1117 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 PRKG1Q13976 671 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 NONOQ15233 471 aaKnown RBP eCLIP7.87□□□□□ -1.15
RTN4-205ENST00000394609 IL17AQ16552 155 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 LETM2Q2VYF4 491 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 USH1GQ495M9 461 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 LONRF3Q496Y0 759 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 KRT25Q7Z3Z0 450 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 RETREG3Q86VR2 466 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 TBCKQ8TEA7 893 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 ZKSCAN4Q969J2 545 aaPredicted RBP7.87□□□□□ -1.15
RTN4-205ENST00000394609 EPSTI1Q96J88 318 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 TRIM47Q96LD4 638 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 PSTPIP2Q9H939 334 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 PRR12Q9ULL5 1215 aa7.87□□□□□ -1.15
RTN4-205ENST00000394609 USP17L15C9J2P7 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L13C9JLJ4 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L11C9JVI0 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L18D6R9N7 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L22D6RA61 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L17D6RBQ6 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L19D6RCP7 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L20D6RJB6 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 hCG_1984214I3L0E3 225 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 CTAGE5O15320 804 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 POLR2DO15514 142 aaKnown RBP7.86□□□□□ -1.15
RTN4-205ENST00000394609 CTNND1O60716 968 aaKnown RBP7.86□□□□□ -1.15
RTN4-205ENST00000394609 BMP15O95972 392 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 LMOD1P29536 600 aaPredicted RBP7.86□□□□□ -1.15
RTN4-205ENST00000394609 STAT2P52630 851 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 INSM1Q01101 510 aaPredicted RBP7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L24Q0WX57 530 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 GPR162Q16538 588 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 ANO6Q4KMQ2 910 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 USP17L6PQ6QN14 398 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 APOBEC3FQ8IUX4 373 aaKnown RBP7.86□□□□□ -1.15
RTN4-205ENST00000394609 FAM177A1Q8N128 213 aaPredicted RBP7.86□□□□□ -1.15
RTN4-205ENST00000394609 ZNF713Q8N859 430 aaPredicted RBP7.86□□□□□ -1.15
RTN4-205ENST00000394609 C4orf32Q8N8J7 132 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 CUL5Q93034 780 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 TMEM60Q9H2L4 133 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 VCPKMTQ9H867 229 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 RIC8AQ9NPQ8 531 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 FBXO28Q9NVF7 368 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 SYNPO2Q9UMS6 1093 aa7.86□□□□□ -1.15
RTN4-205ENST00000394609 GREB1LQ9C091 1923 aaPredicted RBP7.86□□□□□ -1.15
RTN4-205ENST00000394609 MYH6P13533 1939 aa7.85□□□□□ -1.15
RTN4-205ENST00000394609 MYH8P13535 1937 aa7.85□□□□□ -1.15
RTN4-205ENST00000394609 FAM237AA0A1B0GTK4 181 aa7.85□□□□□ -1.15
RTN4-205ENST00000394609 BIN1O00499 593 aa7.85□□□□□ -1.15
RTN4-205ENST00000394609 WIPF1O43516 503 aa7.85□□□□□ -1.15
RTN4-205ENST00000394609 CDC25AP30304 524 aa7.85□□□□□ -1.15
RTN4-205ENST00000394609 MRPL12P52815 198 aaKnown RBP7.85□□□□□ -1.15
RTN4-205ENST00000394609 ISM2Q6H9L7 571 aa7.85□□□□□ -1.15
RTN4-205ENST00000394609 BTNL9Q6UXG8 535 aa7.85□□□□□ -1.15
RTN4-205ENST00000394609 NEK8Q86SG6 692 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms