RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 BEND6Q5SZJ8 279 aaPredicted RBP18.53■□□□□ 0.56
PRDM5-202ENST00000394435 APOBEC3HQ6NTF7 200 aaKnown RBP18.53■□□□□ 0.56
PRDM5-202ENST00000394435 HNRNPLLQ8WVV9 542 aaKnown RBP18.53■□□□□ 0.56
PRDM5-202ENST00000394435 PSTPIP2Q9H939 334 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 ABCB6Q9NP58 842 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 ANKRD31Q8N7Z5 1873 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 IPO7O95373 1038 aaKnown RBP18.52■□□□□ 0.56
PRDM5-202ENST00000394435 ZNF662Q6ZS27 426 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 FAM207AQ9NSI2 230 aaPredicted RBP18.52■□□□□ 0.56
PRDM5-202ENST00000394435 SIK3Q9Y2K2 1263 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 DUSP10Q9Y6W6 482 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 MYH7BA7E2Y1 1941 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 MYH4Q9Y623 1939 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 MYO3BQ8WXR4 1341 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 VSNL1P62760 191 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 MAN2A1Q16706 1144 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 GPATCH4Q5T3I0 446 aaKnown RBP18.52■□□□□ 0.56
PRDM5-202ENST00000394435 TEKT1Q969V4 418 aa18.52■□□□□ 0.56
PRDM5-202ENST00000394435 G3V3G9 751 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 MAP2K7O14733 419 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 SHROOM1Q2M3G4 852 aaPredicted RBP18.51■□□□□ 0.55
PRDM5-202ENST00000394435 DCAF8Q5TAQ9 597 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 KRT26Q7Z3Y9 468 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 GPIHBP1Q8IV16 184 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 MMRN2Q9H8L6 949 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 SUGCTQ9HAC7 445 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 SAR1BQ9Y6B6 198 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 FAM196BA6NMK8 535 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 ERLIN1O75477 346 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 CACNB3P54284 484 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 CDK17Q00537 523 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 EHHADHQ08426 723 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 HHIPL2Q6UWX4 724 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 ZBTB9Q96C00 473 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 LRRC27Q9C0I9 530 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 KCNQ5Q9NR82 932 aa18.51■□□□□ 0.55
PRDM5-202ENST00000394435 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
PRDM5-202ENST00000394435 MACROD2A1Z1Q3 448 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 ERICH4A6NGS2 130 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L15C9J2P7 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L13C9JLJ4 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L11C9JVI0 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L18D6R9N7 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L22D6RA61 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L17D6RBQ6 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L19D6RCP7 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L20D6RJB6 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 ZNF263O14978 683 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 FGFR1OPO95684 399 aaKnown RBP18.5■□□□□ 0.55
PRDM5-202ENST00000394435 SSBP05455 408 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRDM5-202ENST00000394435 FAM193AP78312 1265 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 LRRC63Q05C16 580 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L24Q0WX57 530 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 PAPD7Q5XG87 772 aaKnown RBP18.5■□□□□ 0.55
PRDM5-202ENST00000394435 USP17L6PQ6QN14 398 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 C2CD5Q86YS7 1000 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 EHBP1Q8NDI1 1231 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 DNAJC19Q96DA6 116 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 MTMR8Q96EF0 704 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 CAPZA3Q96KX2 299 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 CCDC42Q96M95 316 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 MMS19Q96T76 1030 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 PCDHA12Q9UN75 941 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 PCDHAC2Q9Y5I4 1007 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 COASYQ13057 564 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 PSMD2Q13200 908 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 LRRC55Q6ZSA7 311 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 ARHGAP20Q9P2F6 1191 aa18.5■□□□□ 0.55
PRDM5-202ENST00000394435 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
PRDM5-202ENST00000394435 H3BQF6 201 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 CRKP46108 304 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 VAV2P52735 878 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 TCP10Q12799 353 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 PROM2Q8N271 834 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 TSG101Q99816 390 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 PANK4Q9NVE7 773 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 RNF216Q9NWF9 866 aaPredicted RBP18.49■□□□□ 0.55
PRDM5-202ENST00000394435 TBC1D7Q9P0N9 293 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 PLAGL2Q9UPG8 496 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
PRDM5-202ENST00000394435 ARFGEF1Q9Y6D6 1849 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 E9PMD0 336 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 NPR1P16066 1061 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 SPA17Q15506 151 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 QRICH1Q2TAL8 776 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 HDXQ7Z353 690 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 CCDC155Q8N6L0 562 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 DBNDD1Q9H9R9 158 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 L1RE1Q9UN81 338 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 C10orf71Q711Q0 1435 aa18.49■□□□□ 0.55
PRDM5-202ENST00000394435 GCFC2P16383 781 aaKnown RBP18.48■□□□□ 0.55
PRDM5-202ENST00000394435 KIF5AQ12840 1032 aa18.48■□□□□ 0.55
PRDM5-202ENST00000394435 MYOCDQ8IZQ8 938 aa18.48■□□□□ 0.55
PRDM5-202ENST00000394435 SMCR8Q8TEV9 937 aaPredicted RBP18.48■□□□□ 0.55
PRDM5-202ENST00000394435 IQCDQ96DY2 449 aa18.48■□□□□ 0.55
PRDM5-202ENST00000394435 PURBQ96QR8 312 aaKnown RBP18.48■□□□□ 0.55
PRDM5-202ENST00000394435 FGFBP2Q9BYJ0 223 aa18.48■□□□□ 0.55
PRDM5-202ENST00000394435 EEF2P13639 858 aaKnown RBP18.48■□□□□ 0.55
PRDM5-202ENST00000394435 HNRNPH3P31942 346 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms