RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 KIAA0895Q8NCT3 520 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 TRIM58Q8NG06 486 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 CUEDC2Q9H467 287 aa11.68□□□□□ -0.54
ACTN1-203ENST00000394419 MYH3P11055 1940 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 USP17L10C9JJH3 530 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 EPHB6O15197 1021 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 SERPINB2P05120 415 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 SLC1A4P43007 532 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 VAV2P52735 878 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 USP14P54578 494 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 EZH2Q15910 746 aaKnown RBP11.67□□□□□ -0.54
ACTN1-203ENST00000394419 CERS3Q8IU89 383 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 TAF4BQ92750 862 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■□□□□ 10.2
ACTN1-203ENST00000394419 EXOC4Q96A65 974 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
ACTN1-203ENST00000394419 FAM107BQ9H098 131 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 PACSIN2Q9UNF0 486 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-203ENST00000394419 CAPN6Q9Y6Q1 641 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 MYH13Q9UKX3 1938 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 MAN2A1Q16706 1144 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 C8orf74Q6P047 294 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 KIAA0825Q8IV33 1275 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 KLHL7Q8IXQ5 586 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 COG1Q8WTW3 980 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 CUL5Q93034 780 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 TSGA10Q9BZW7 698 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 USP21Q9UK80 565 aa11.67□□□□□ -0.54
ACTN1-203ENST00000394419 UBAP1LF5GYI3 381 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 ZEB2O60315 1214 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 MYL1P05976 194 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 ACTN2P35609 894 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 STAT3P40763 770 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 GUCY2FP51841 1108 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 EHHADHQ08426 723 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 SLC9C1Q4G0N8 1177 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 PRR16Q569H4 304 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 DNAJC7Q99615 494 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 ADAMTS1Q9UHI8 967 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 SLIT2O94813 1529 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 LRP6O75581 1613 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 ESYT3A0FGR9 886 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 CHMP2AO43633 222 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 TUBBP07437 444 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 PDHBP11177 359 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 GGCXP38435 758 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 KLHL30Q0D2K2 578 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 PABPC4Q13310 644 aaKnown RBP eCLIP11.66□□□□□ -0.546e-7■■□□□ 13.6
ACTN1-203ENST00000394419 KCTD16Q68DU8 428 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 TRAPPC11Q7Z392 1133 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 DNAAF5Q86Y56 855 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 CCDC65Q8IXS2 484 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 TBC1D5Q92609 795 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 MS4A14Q96JA4 679 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 NOX5Q96PH1 765 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 LRRC1Q9BTT6 524 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 SPZ1Q9BXG8 430 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 RTFDC1Q9BY42 306 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-203ENST00000394419 FAM53CQ9NYF3 392 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 BCCIPQ9P287 314 aaKnown RBP eCLIP11.66□□□□□ -0.54
ACTN1-203ENST00000394419 SERPINB13Q9UIV8 391 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 PCDHA1Q9Y5I3 950 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 GOLGA6CA6NDK9 693 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 POTECB2RU33 542 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 EIF3CLB5ME19 914 aaKnown RBP11.66□□□□□ -0.54
ACTN1-203ENST00000394419 GOLGA6DP0CG33 693 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 ATP2B4P23634 1241 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 GRB10Q13322 594 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 PLS1Q14651 629 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 KIAA0753Q2KHM9 967 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 SFMBT2Q5VUG0 894 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 UNC13DQ70J99 1090 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 KCNK18Q7Z418 384 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 ADGRF4Q8IZF3 695 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 FAM71BQ8TC56 605 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 EIF3CQ99613 913 aaKnown RBP11.66□□□□□ -0.54
ACTN1-203ENST00000394419 GOLGA6AQ9NYA3 693 aa11.66□□□□□ -0.54
ACTN1-203ENST00000394419 UBR2Q8IWV8 1755 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 PDE2AO00408 941 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-203ENST00000394419 TRIM66O15016 1216 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 PRPHP41219 470 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 ADAM9Q13443 819 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 PRPF4BQ13523 1007 aaKnown RBP11.65□□□□□ -0.54
ACTN1-203ENST00000394419 PRR5LQ6MZQ0 368 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 MSANTD4Q8NCY6 345 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 ZNF507Q8TCN5 953 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 C7orf25Q9BPX7 421 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 SELENOOQ9BVL4 669 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 PSMD14O00487 310 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 C16orf86Q6ZW13 317 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 MAATS1Q7Z4T9 603 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 SPICE1Q8N0Z3 855 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms