RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 COPS5Q92905 334 aa16.33■□□□□ 0.2
IGHV3-48-201ENST00000390624 BRF1Q92994 677 aa16.33■□□□□ 0.2
IGHV3-48-201ENST00000390624 AGXT2Q9BYV1 514 aa16.33■□□□□ 0.2
IGHV3-48-201ENST00000390624 PSTPIP2Q9H939 334 aa16.33■□□□□ 0.2
IGHV3-48-201ENST00000390624 ZSWIM6Q9HCJ5 1215 aa16.33■□□□□ 0.2
IGHV3-48-201ENST00000390624 TMEM39AQ9NV64 488 aa16.33■□□□□ 0.2
IGHV3-48-201ENST00000390624 DDX41Q9UJV9 622 aaKnown RBP16.33■□□□□ 0.2
IGHV3-48-201ENST00000390624 TRIM43BA6NCK2 446 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 A6NJR5 290 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 MEIS2O14770 477 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 KPNA6O60684 536 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 GH1P01241 217 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 METAP2P50579 478 aaKnown RBP eCLIP16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 ITGA7Q13683 1181 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 KCNV1Q6PIU1 500 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 SLC43A3Q8NBI5 491 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 TRIM43Q96BQ3 446 aaPredicted RBP16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 FAM217BQ9NTX9 383 aaPredicted RBP16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 MRVI1Q9Y6F6 885 aa16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
IGHV3-48-201ENST00000390624 CNTNAP5Q8WYK1 1306 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 KIAA0355O15063 1070 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 MYL3P08590 195 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 TGFB3P10600 412 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 CDC27P30260 824 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 ADD1P35611 737 aaKnown RBP16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 PURAQ00577 322 aaKnown RBP16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 FUT2Q10981 343 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 USP17L6PQ6QN14 398 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 TM6SF1Q9BZW5 370 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 CYP46A1Q9Y6A2 500 aa16.31■□□□□ 0.2
IGHV3-48-201ENST00000390624 GRIN2DO15399 1336 aa16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 STAM2O75886 525 aa16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 RGS20O76081 388 aa16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 RAG1P15918 1043 aa16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 FAM126BQ8IXS8 530 aa16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 TDHQ8IZJ6 230 aa16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 IL31RAQ8NI17 732 aa16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 BADQ92934 168 aa16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
IGHV3-48-201ENST00000390624 TRIOBPQ9H2D6 2365 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 FRMPD4Q14CM0 1322 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 CD4P01730 458 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 EVCP57679 992 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 PSMC6P62333 389 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 ARHGAP1Q07960 439 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 LAMC2Q13753 1193 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 XRRA1Q6P2D8 792 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 AFG1LQ8WV93 481 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 EMID1Q96A84 441 aaPredicted RBP16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 MYH7BA7E2Y1 1941 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 LTBP2Q14767 1821 aa16.29■□□□□ 0.2
IGHV3-48-201ENST00000390624 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 TIMP1P01033 207 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 ITGB8P26012 769 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 NAPAP54920 295 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 GNPTABQ3T906 1256 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 TEX2Q8IWB9 1127 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 TBX21Q9UL17 535 aa16.28■□□□□ 0.2
IGHV3-48-201ENST00000390624 NID2Q14112 1375 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 LAMA3Q16787 3333 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 SPDYE3A6NKU9 549 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 MMP3P08254 477 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 PDIA3P30101 505 aaKnown RBP16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 DGKDQ16760 1214 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 CELF3Q5SZQ8 465 aaKnown RBP16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 MYSM1Q5VVJ2 828 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 PPP1R18Q6NYC8 613 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 INPP4AQ96PE3 977 aaPredicted RBP16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 BARHL2Q9NY43 387 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 RTEL1Q9NZ71 1219 aa16.27■□□□□ 0.2
IGHV3-48-201ENST00000390624 SPATA31C2B4DYI2 1134 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 STXBP3O00186 592 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 ICAM3P32942 547 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 ANAPC15P60006 121 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 SP2Q02086 613 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 UBE2SQ16763 222 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 NBPF20Q3BBV1 942 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 NFRKBQ6P4R8 1299 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 PPTC7Q8NI37 304 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 ZNF274Q96GC6 653 aaPredicted RBP16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 TRPV6Q9H1D0 765 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 ALDH8A1Q9H2A2 487 aaPredicted RBP16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
IGHV3-48-201ENST00000390624 PCDHA6Q9UN73 950 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms