RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 NHEJ1Q9H9Q4 299 aaPredicted RBP15.44■□□□□ 0.06
NEK4-202ENST00000383721 BIN2Q9UBW5 565 aaPredicted RBP15.44■□□□□ 0.06
NEK4-202ENST00000383721 HNRNPH2P55795 449 aaKnown RBP15.44■□□□□ 0.06
NEK4-202ENST00000383721 STRIP1Q5VSL9 837 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 PAPD7Q5XG87 772 aaKnown RBP15.44■□□□□ 0.06
NEK4-202ENST00000383721 KIAA1328Q86T90 577 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 FAM114A1Q8IWE2 563 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 JAKMIP2Q96AA8 810 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 NOC4LQ9BVI4 516 aaKnown RBP15.44■□□□□ 0.06
NEK4-202ENST00000383721 UBA5Q9GZZ9 404 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 TMEM260Q9NX78 707 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 CALCOCO1Q9P1Z2 691 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
NEK4-202ENST00000383721 ADAM21Q9UKJ8 722 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 NAV1Q8NEY1 1877 aa15.44■□□□□ 0.06
NEK4-202ENST00000383721 SRGAP2O75044 1071 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 TUBBP07437 444 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 CYLC1P35663 651 aaPredicted RBP15.43■□□□□ 0.06
NEK4-202ENST00000383721 WDR93Q6P2C0 686 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 ZBTB9Q96C00 473 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 ERGIC2Q96RQ1 377 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 MMS19Q96T76 1030 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 ZNHIT6Q9NWK9 470 aaKnown RBP15.43■□□□□ 0.06
NEK4-202ENST00000383721 SAR1BQ9Y6B6 198 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 GJA3Q9Y6H8 435 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 USP17L5A8MUK1 530 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 EIF3CLB5ME19 914 aaKnown RBP15.43■□□□□ 0.06
NEK4-202ENST00000383721 SMARCA1P28370 1054 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 PPP1R2P41236 205 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 NOVP48745 357 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 RHBDL3P58872 404 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 AMPD3Q01432 767 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 GRB10Q13322 594 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 CASP8Q14790 479 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 COBLL1Q53SF7 1204 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 CCDC170Q8IYT3 715 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 REXO1Q8N1G1 1221 aaKnown RBP15.43■□□□□ 0.06
NEK4-202ENST00000383721 TXLNBQ8N3L3 684 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 MTMR9Q96QG7 549 aa15.43■□□□□ 0.06
NEK4-202ENST00000383721 EIF3CQ99613 913 aaKnown RBP15.43■□□□□ 0.06
NEK4-202ENST00000383721 KRT86O43790 486 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 N4BP1O75113 896 aaKnown RBP15.42■□□□□ 0.06
NEK4-202ENST00000383721 TXKP42681 527 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 FIGNQ5HY92 759 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 CIAPIN1Q6FI81 312 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 CENPPQ6IPU0 288 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 CNNM4Q6P4Q7 775 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 CERS3Q8IU89 383 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 KIAA0825Q8IV33 1275 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 PCMTD1Q96MG8 357 aaPredicted RBP15.42■□□□□ 0.06
NEK4-202ENST00000383721 GBP3Q9H0R5 595 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 SLC39A2Q9NP94 309 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 BLOC1S4Q9NUP1 217 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 DUSP10Q9Y6W6 482 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 DICER1Q9UPY3 1922 aaKnown RBP15.42■□□□□ 0.06
NEK4-202ENST00000383721 ESYT2A0FGR8 921 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 SHTN1A0MZ66 631 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 VIL1P09327 827 aaKnown RBP15.42■□□□□ 0.06
NEK4-202ENST00000383721 USP14P54578 494 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 CYP27A1Q02318 531 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 GPS2Q13227 327 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 EXOC4Q96A65 974 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 CALML4Q96GE6 196 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 PNMA5Q96PV4 448 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
NEK4-202ENST00000383721 DDX60LQ5H9U9 1706 aaKnown RBP15.42■□□□□ 0.06
NEK4-202ENST00000383721 A0A1W2PQJ5 194 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 MYMKA6NI61 221 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 EDIL3O43854 480 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 EIF6P56537 245 aaKnown RBP15.41■□□□□ 0.06
NEK4-202ENST00000383721 ORC2Q13416 577 aaPredicted RBP15.41■□□□□ 0.06
NEK4-202ENST00000383721 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 ZNF263O14978 683 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 SCNN1DP51172 638 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 CDK17Q00537 523 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
NEK4-202ENST00000383721 SV2BQ7L1I2 683 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 PURBQ96QR8 312 aaKnown RBP15.41■□□□□ 0.06
NEK4-202ENST00000383721 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
NEK4-202ENST00000383721 PSD3Q9NYI0 1048 aa15.41■□□□□ 0.06
NEK4-202ENST00000383721 LRRIQ3A6PVS8 624 aaPredicted RBP15.4■□□□□ 0.06
NEK4-202ENST00000383721 SLC37A4O43826 429 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
NEK4-202ENST00000383721 DDNO94850 711 aaPredicted RBP15.4■□□□□ 0.06
NEK4-202ENST00000383721 IPO7O95373 1038 aaKnown RBP15.4■□□□□ 0.06
NEK4-202ENST00000383721 FRMPD2Q68DX3 1309 aaPredicted RBP15.4■□□□□ 0.06
NEK4-202ENST00000383721 TBC1D22AQ8WUA7 517 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 CAPZA3Q96KX2 299 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 VPS18Q9P253 973 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 LRWD1Q9UFC0 647 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 PCDHAC2Q9Y5I4 1007 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 EPHB6O15197 1021 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 PLEKP08567 350 aaPredicted RBP15.4■□□□□ 0.06
NEK4-202ENST00000383721 PDHBP11177 359 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 PLCG2P16885 1265 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
NEK4-202ENST00000383721 CALCRLQ16602 461 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 FKBP15Q5T1M5 1219 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 COA7Q96BR5 231 aa15.4■□□□□ 0.06
NEK4-202ENST00000383721 FAM163AQ96GL9 167 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms