RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 GOLGA5Q8TBA6 731 aa16.01■□□□□ 0.15
TCOF1-202ENST00000377797 NYAP2Q9P242 653 aa16.01■□□□□ 0.15
TCOF1-202ENST00000377797 BRDTQ58F21 947 aaPredicted RBP16■□□□□ 0.15
TCOF1-202ENST00000377797 USP49Q70CQ1 688 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 KIAA1524Q8TCG1 905 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 CWC15Q9P013 229 aaKnown RBP16■□□□□ 0.15
TCOF1-202ENST00000377797 ZNF70Q9UC06 446 aaPredicted RBP16■□□□□ 0.15
TCOF1-202ENST00000377797 RIC1Q4ADV7 1423 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 GJC1P36383 396 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 SEC23AQ15436 765 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 MYRIPQ8NFW9 859 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 RAVER2Q9HCJ3 691 aaKnown RBP16■□□□□ 0.15
TCOF1-202ENST00000377797 FEM1BQ9UK73 627 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 IL1R1P14778 569 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 SARM1Q6SZW1 724 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 PRPF38AQ8NAV1 312 aaKnown RBP16■□□□□ 0.15
TCOF1-202ENST00000377797 ATP6V0A1Q93050 837 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 SUGCTQ9HAC7 445 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 EMILIN3Q9NT22 766 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 POLR2FP61218 127 aaKnown RBP16■□□□□ 0.15
TCOF1-202ENST00000377797 TUBB4BP68371 445 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 CTTNQ14247 550 aaKnown RBP16■□□□□ 0.15
TCOF1-202ENST00000377797 DDX12PQ92771 950 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 NOX5Q96PH1 765 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 CEP83Q9Y592 693 aa16■□□□□ 0.15
TCOF1-202ENST00000377797 BCRP11274 1271 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 KIFAP3Q92845 792 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 MAP3K14Q99558 947 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 IREB2P48200 963 aaKnown RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 HDLBPQ00341 1268 aaKnown RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 ARMCX5Q6P1M9 558 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 GBP6Q6ZN66 633 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 RNF207Q6ZRF8 634 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 METTL16Q86W50 562 aaKnown RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 VSTM4Q8IW00 320 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 MICALL2Q8IY33 904 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 CNOT7Q9UIV1 285 aaKnown RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 PDS5AQ29RF7 1337 aaKnown RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 PLSCR1O15162 318 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 TNNI1P19237 187 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 FAM151AQ8WW52 585 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 CCDC127Q96BQ5 260 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 EPN1Q9Y6I3 576 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 GAP43P17677 238 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 HOXA10P31260 410 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 STAT1P42224 750 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 TRPC3Q13507 836 aa15.99■□□□□ 0.15
TCOF1-202ENST00000377797 SEPT7Q16181 437 aaKnown RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 SCAF8Q9UPN6 1271 aaKnown RBP15.99■□□□□ 0.15
TCOF1-202ENST00000377797 RBL2Q08999 1139 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 ORC2Q13416 577 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-202ENST00000377797 PSMB7Q99436 277 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 TRPC6Q9Y210 931 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 POLGP54098 1239 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-202ENST00000377797 DMP1Q13316 513 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-202ENST00000377797 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 CCDC113Q9H0I3 377 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 PSMD2Q13200 908 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 MAN2A1Q16706 1144 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 SEPT14Q6ZU15 432 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 CDHR1Q96JP9 859 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 FAM20AQ96MK3 541 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 RMDN3Q96TC7 470 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 ADD3Q9UEY8 706 aaKnown RBP15.98■□□□□ 0.15
TCOF1-202ENST00000377797 STXBP3O00186 592 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 ARID5BQ14865 1188 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 NTRK3Q16288 839 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 METTL13Q8N6R0 699 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 PIGOQ8TEQ8 1089 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 PRMT6Q96LA8 375 aaPredicted RBP15.98■□□□□ 0.15
TCOF1-202ENST00000377797 RNF181Q9P0P0 153 aa15.98■□□□□ 0.15
TCOF1-202ENST00000377797 LRRIQ4A6NIV6 560 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 LIG4P49917 911 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 UNC13DQ70J99 1090 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 PDLIM2Q96JY6 352 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 TOPAZ1Q8N9V7 1692 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 BAZ2BQ9UIF8 2168 aaKnown RBP15.97■□□□□ 0.15
TCOF1-202ENST00000377797 E9PMD0 336 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 CLIC2O15247 247 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 KRT31Q15323 416 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 UTP14CQ5TAP6 766 aaKnown RBP15.97■□□□□ 0.15
TCOF1-202ENST00000377797 EEPD1Q7L9B9 569 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 FBXL16Q8N461 479 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 BCCIPQ9P287 314 aaKnown RBP eCLIP15.97■□□□□ 0.15
TCOF1-202ENST00000377797 SEPT9Q9UHD8 586 aaPredicted RBP15.97■□□□□ 0.15
TCOF1-202ENST00000377797 RNASE9P60153 205 aaKnown RBP15.97■□□□□ 0.15
TCOF1-202ENST00000377797 APOBEC3FQ8IUX4 373 aaKnown RBP15.97■□□□□ 0.15
TCOF1-202ENST00000377797 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 SALL1Q9NSC2 1324 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 POTEB3A0JP26 581 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 POTECB2RU33 542 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 NEBLO76041 1014 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 PRCPP42785 496 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 EXOC3L4Q17RC7 722 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 POTEBQ6S5H4 581 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 ARMC9Q7Z3E5 817 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 PARVGQ9HBI0 331 aa15.97■□□□□ 0.15
TCOF1-202ENST00000377797 MAATS1Q7Z4T9 603 aa15.96■□□□□ 0.15
TCOF1-202ENST00000377797 ZDHHC15Q96MV8 337 aa15.96■□□□□ 0.15
TCOF1-202ENST00000377797 TMEM39BQ9GZU3 492 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms