RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 SHOX2O60902 331 aaPredicted RBP16.37■□□□□ 0.21
UBA1-202ENST00000377269 USP2O75604 605 aaPredicted RBP16.37■□□□□ 0.21
UBA1-202ENST00000377269 NDUFB10O96000 172 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 BANK1Q8NDB2 785 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 ZNF112Q9UJU3 913 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 KCNJ14Q9UNX9 436 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 ADGRG1Q9Y653 693 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
UBA1-202ENST00000377269 SLC1A4P43007 532 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 SYKP43405 635 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 ZNF543Q08ER8 600 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 PNMA8AQ86V59 439 aaPredicted RBP16.37■□□□□ 0.21
UBA1-202ENST00000377269 CDCA5Q96FF9 252 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 PANX2Q96RD6 677 aa16.37■□□□□ 0.21
UBA1-202ENST00000377269 STK36Q9NRP7 1315 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 FAM237AA0A1B0GTK4 181 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 TRAF5O00463 557 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 DEXIO95424 95 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
UBA1-202ENST00000377269 RHOXF2BP0C7M4 288 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
UBA1-202ENST00000377269 WHAMMP3Q1A5X7 153 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 ANO1Q5XXA6 986 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 RHOXF2Q9BQY4 288 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 VPS54Q9P1Q0 977 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 TMX2Q9Y320 296 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 ZNF18P17022 549 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 HNRNPH1P31943 449 aaKnown RBP16.36■□□□□ 0.21
UBA1-202ENST00000377269 USP8P40818 1118 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 MTF1Q14872 753 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 KRT40Q6A162 431 aa16.36■□□□□ 0.21
UBA1-202ENST00000377269 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 CTAGE9A4FU28 777 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 GPKOWQ92917 476 aaPredicted RBP eCLIP16.35■□□□□ 0.219e-6■■□□□ 14.5
UBA1-202ENST00000377269 ARHGEF10LQ9HCE6 1279 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 LZTFL1Q9NQ48 299 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 GNAQP50148 359 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 SLC39A14Q15043 492 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 SCYL3Q8IZE3 742 aa16.35■□□□□ 0.21
UBA1-202ENST00000377269 NAA15Q9BXJ9 866 aaKnown RBP16.35■□□□□ 0.21
UBA1-202ENST00000377269 KIF28PB7ZC32 967 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 PTPRAP18433 802 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 PNOCQ13519 176 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 ASPRV1Q53RT3 343 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 KCNV1Q6PIU1 500 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.34■□□□□ 0.21
UBA1-202ENST00000377269 GMCL1P1Q8NEA9 526 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.34■□□□□ 0.215e-9■■■■□ 22.2
UBA1-202ENST00000377269 HOOK2Q96ED9 719 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 PIGSQ96S52 555 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 SOWAHDA6NJG2 315 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 SPP2Q13103 211 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 ZNF569Q5MCW4 686 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 TYW1BQ6NUM6 668 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 RAD9BQ6WBX8 426 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 CLIC6Q96NY7 704 aa16.34■□□□□ 0.21
UBA1-202ENST00000377269 WDR90Q96KV7 1748 aa16.33■□□□□ 0.21
UBA1-202ENST00000377269 AKR1B15C9JRZ8 316 aaPredicted RBP16.33■□□□□ 0.2
UBA1-202ENST00000377269 MNAT1P51948 309 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 SNAP25P60880 206 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 ADGRF4Q8IZF3 695 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 A1CFQ9NQ94 594 aaKnown RBP16.33■□□□□ 0.2
UBA1-202ENST00000377269 SUFUQ9UMX1 484 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 ZHX2Q9Y6X8 837 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 MYH4Q9Y623 1939 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 SCG2P13521 617 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 BMP6P22004 513 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 LIG3P49916 1009 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 VGLL4Q14135 290 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.2
UBA1-202ENST00000377269 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 IGSF22Q8N9C0 903 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 RIOX1Q9H6W3 641 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 ZNF408Q9H9D4 720 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 JMJD4Q9H9V9 463 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 PICK1Q9NRD5 415 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 FAM169AQ9Y6X4 670 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 SCN4AP35499 1836 aa16.33■□□□□ 0.2
UBA1-202ENST00000377269 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
UBA1-202ENST00000377269 PPP1R12BO60237 982 aaPredicted RBP16.32■□□□□ 0.2
UBA1-202ENST00000377269 MTMR2Q13614 643 aa16.32■□□□□ 0.2
UBA1-202ENST00000377269 NR1I3Q14994 352 aa16.32■□□□□ 0.2
UBA1-202ENST00000377269 GPATCH4Q5T3I0 446 aaKnown RBP16.32■□□□□ 0.2
UBA1-202ENST00000377269 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
UBA1-202ENST00000377269 OXER1Q8TDS5 423 aa16.32■□□□□ 0.2
UBA1-202ENST00000377269 DCAF4Q8WV16 495 aa16.32■□□□□ 0.2
UBA1-202ENST00000377269 WASF1Q92558 559 aa16.32■□□□□ 0.2
UBA1-202ENST00000377269 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
UBA1-202ENST00000377269 LZTS2Q9BRK4 669 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms