RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 CCDC175P0C221 793 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 USP11P51784 963 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 AP3B2Q13367 1082 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 BTNL9Q6UXG8 535 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 CDAN1Q8IWY9 1227 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 RTKN2Q8IZC4 609 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 PDCL2Q8N4E4 241 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 DDX12PQ92771 950 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 CNOT6LQ96LI5 555 aaKnown RBP24.23■■□□□ 1.47
RNF39-202ENST00000376751 GTPBP4Q9BZE4 634 aaKnown RBP24.23■■□□□ 1.47
RNF39-202ENST00000376751 HERC5Q9UII4 1024 aaKnown RBP24.23■■□□□ 1.47
RNF39-202ENST00000376751 B4DLN1 442 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 PPP1R2P41236 205 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 ARHGAP4P98171 946 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 EHHADHQ08426 723 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 HYIQ5T013 277 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 ACER1Q8TDN7 264 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 TUBGCP2Q9BSJ2 902 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 A0A1W2PQC6 194 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 GNG11P61952 73 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 DLGAP5Q15398 846 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 CENPPQ6IPU0 288 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 GLIS3Q8NEA6 775 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 KIF13BQ9NQT8 1826 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 PES1O00541 588 aaKnown RBP24.22■■□□□ 1.47
RNF39-202ENST00000376751 KRT9P35527 623 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 STAT3P40763 770 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 MMP14P50281 582 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 FAM151AQ8WW52 585 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 KIFC2Q96AC6 838 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 DNAJC19Q96DA6 116 aa24.22■■□□□ 1.47
RNF39-202ENST00000376751 TTC26A0AVF1 554 aa24.21■■□□□ 1.47
RNF39-202ENST00000376751 PRKCSHP14314 528 aaPredicted RBP24.21■■□□□ 1.47
RNF39-202ENST00000376751 IDEP14735 1019 aa24.21■■□□□ 1.47
RNF39-202ENST00000376751 ELF2Q15723 593 aa24.21■■□□□ 1.47
RNF39-202ENST00000376751 SPDYE2Q495Y8 402 aa24.21■■□□□ 1.47
RNF39-202ENST00000376751 ETNPPLQ8TBG4 499 aa24.21■■□□□ 1.47
RNF39-202ENST00000376751 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.21■■□□□ 1.47
RNF39-202ENST00000376751 PRR12Q9ULL5 1215 aa24.21■■□□□ 1.47
RNF39-202ENST00000376751 GRIPAP1Q4V328 841 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 MIIPQ5JXC2 388 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 MOXD1Q6UVY6 613 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 ACRBPQ8NEB7 543 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 IRX2Q9BZI1 471 aaPredicted RBP24.2■■□□□ 1.46
RNF39-202ENST00000376751 POTEB3A0JP26 581 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 POTECB2RU33 542 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 POTEBQ6S5H4 581 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 DEFB132Q7Z7B7 95 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 TMTC1Q8IUR5 882 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 LENG9Q96B70 501 aa24.2■■□□□ 1.46
RNF39-202ENST00000376751 KDM3AQ9Y4C1 1321 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 RASSF10A6NK89 507 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 E9PMD0 336 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 URI1O94763 535 aaPredicted RBP24.19■■□□□ 1.46
RNF39-202ENST00000376751 KLK7P49862 253 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 DNM2P50570 870 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 PRR16Q569H4 304 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 FAM114A1Q8IWE2 563 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 GUF1Q8N442 669 aaKnown RBP24.19■■□□□ 1.46
RNF39-202ENST00000376751 LZTFL1Q9NQ48 299 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 HDAC9Q9UKV0 1011 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 ZBTB21Q9ULJ3 1066 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 SYNPO2Q9UMS6 1093 aa24.19■■□□□ 1.46
RNF39-202ENST00000376751 HOXA13P31271 388 aaPredicted RBP24.18■■□□□ 1.46
RNF39-202ENST00000376751 SREBF1P36956 1147 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 MTIF2P46199 727 aaKnown RBP24.18■■□□□ 1.46
RNF39-202ENST00000376751 SPIRE1Q08AE8 756 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 COASYQ13057 564 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 LRRC41Q15345 812 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 CYP26C1Q6V0L0 522 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 VEZTQ9HBM0 779 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 KIAA1024Q9UPX6 916 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 MED24O75448 989 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 CASQ1P31415 396 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 DNAJC7Q99615 494 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 TTYH3Q9C0H2 523 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 LRRC27Q9C0I9 530 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 TMEM39BQ9GZU3 492 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 ARHGEF10LQ9HCE6 1279 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 TMX2Q9Y320 296 aa24.18■■□□□ 1.46
RNF39-202ENST00000376751 FAM86B1E9PN63 330 aa24.17■■□□□ 1.46
RNF39-202ENST00000376751 SSBP05455 408 aaKnown RBP eCLIP24.17■■□□□ 1.46
RNF39-202ENST00000376751 FAM86B2P0C5J1 330 aa24.17■■□□□ 1.46
RNF39-202ENST00000376751 FAM83BQ5T0W9 1011 aa24.17■■□□□ 1.46
RNF39-202ENST00000376751 CHP1Q99653 195 aa24.17■■□□□ 1.46
RNF39-202ENST00000376751 NT5C3AQ9H0P0 336 aa24.17■■□□□ 1.46
RNF39-202ENST00000376751 CAPN11Q9UMQ6 739 aa24.17■■□□□ 1.46
RNF39-202ENST00000376751 Q4G0T1 1027 aa24.16■■□□□ 1.46
RNF39-202ENST00000376751 SLFN12Q8IYM2 578 aa24.16■■□□□ 1.46
RNF39-202ENST00000376751 OGFOD1Q8N543 542 aa24.16■■□□□ 1.46
RNF39-202ENST00000376751 FGFBP2Q9BYJ0 223 aa24.16■■□□□ 1.46
RNF39-202ENST00000376751 NPHP3-ACAD11A0A0J9YXS1 232 aa24.16■■□□□ 1.46
RNF39-202ENST00000376751 SPDYE3A6NKU9 549 aa24.16■■□□□ 1.46
RNF39-202ENST00000376751 PLA2G4BP0C869 781 aa24.16■■□□□ 1.46
RNF39-202ENST00000376751 STAT2P52630 851 aa24.16■■□□□ 1.46
RNF39-202ENST00000376751 NOC4LQ9BVI4 516 aaKnown RBP24.16■■□□□ 1.46
RNF39-202ENST00000376751 CCDC94Q9BW85 323 aaPredicted RBP24.16■■□□□ 1.46
RNF39-202ENST00000376751 LUC7L2Q9Y383 392 aaKnown RBP24.16■■□□□ 1.46
RNF39-202ENST00000376751 POTEFA5A3E0 1075 aa24.15■■□□□ 1.46
RNF39-202ENST00000376751 ABL1P00519 1130 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms