RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
MCF2L-202ENST00000375597 KIAA0895Q8NCT3 520 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L15C9J2P7 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L13C9JLJ4 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L11C9JVI0 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L18D6R9N7 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L22D6RA61 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L17D6RBQ6 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L19D6RCP7 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L20D6RJB6 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 TMOD1P28289 359 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 ACTN3Q08043 901 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L24Q0WX57 530 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
MCF2L-202ENST00000375597 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 GJB7Q6PEY0 223 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 USP17L6PQ6QN14 398 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 DDX12PQ92771 950 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 SCLT1Q96NL6 688 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 MED4Q9NPJ6 270 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
MCF2L-202ENST00000375597 ARFGEF2Q9Y6D5 1785 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 DDAH1O94760 285 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 CAMTA2O94983 1202 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 KLHL30Q0D2K2 578 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 KIRREL3Q8IZU9 778 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 EHBP1Q8NDI1 1231 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 CEP95Q96GE4 821 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 ZIM3Q96PE6 472 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 SH2D3AQ9BRG2 576 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 DDX47Q9H0S4 455 aaKnown RBP13.03□□□□□ -0.32
MCF2L-202ENST00000375597 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 MYH15Q9Y2K3 1946 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 PPFIA4O75335 1185 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 NTSR2O95665 410 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 MUM1L1Q5H9M0 696 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 KRT79Q5XKE5 535 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 NEK8Q86SG6 692 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 C6orf50Q9HD87 102 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 SNX12Q9UMY4 172 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 ZNF652Q9Y2D9 606 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 GOLGA6L10A6NI86 522 aa13.03□□□□□ -0.32
MCF2L-202ENST00000375597 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.32
MCF2L-202ENST00000375597 BICDL2A1A5D9 508 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 AGPSO00116 658 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 SRGNP10124 158 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 EEF1GP26641 437 aaKnown RBP13.02□□□□□ -0.32
MCF2L-202ENST00000375597 KLRC1P26715 233 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 E2F5Q15329 346 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 CCDC25Q86WR0 208 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 TNFRSF25Q93038 417 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 NOX5Q96PH1 765 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 JPH2Q9BR39 696 aaPredicted RBP13.02□□□□□ -0.32
MCF2L-202ENST00000375597 UBXN6Q9BZV1 441 aa13.02□□□□□ -0.32
MCF2L-202ENST00000375597 DNAJC17Q9NVM6 304 aaKnown RBP13.02□□□□□ -0.32
MCF2L-202ENST00000375597 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 KLRC4O43908 158 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 BTDP43251 543 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 SLCO1A2P46721 670 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 IFFO1Q0D2I5 559 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 VWA3BQ502W6 1294 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 DPP8Q6V1X1 898 aaPredicted RBP13.02□□□□□ -0.33
MCF2L-202ENST00000375597 PHLDB2Q86SQ0 1253 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 TRIM58Q8NG06 486 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 LARP4BQ92615 738 aaKnown RBP13.02□□□□□ -0.33
MCF2L-202ENST00000375597 EP400Q96L91 3159 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 ZNF804BA4D1E1 1349 aa13.02□□□□□ -0.33
MCF2L-202ENST00000375597 SHROOM1Q2M3G4 852 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 TSG101Q99816 390 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 MLXIPLQ9NP71 852 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 FAM184BQ9ULE4 1060 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 BAZ2AQ9UIF9 1905 aaKnown RBP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 POTECB2RU33 542 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 PSMD14O00487 310 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 UFL1O94874 794 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 AMPD3Q01432 767 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 CNNM4Q6P4Q7 775 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 CREG2Q8IUH2 290 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 FAM114A1Q8IWE2 563 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 MGARPQ8TDB4 240 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 PPM1EQ8WY54 764 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 RNPC3Q96LT9 517 aaKnown RBP13.01□□□□□ -0.33
MCF2L-202ENST00000375597 SELENOSQ9BQE4 189 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 STIM2Q9P246 746 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 MAD2L2Q9UI95 211 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 KIF1AQ12756 1690 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 MAGEA9P43362 315 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 IFNAR2P48551 515 aa13.01□□□□□ -0.33
MCF2L-202ENST00000375597 TADA2BQ86TJ2 420 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms