RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 PGM5Q15124 567 aa18.03■□□□□ 0.48
SDHB-201ENST00000375499 STXBP2Q15833 593 aa18.03■□□□□ 0.48
SDHB-201ENST00000375499 FCHSD1Q86WN1 690 aa18.03■□□□□ 0.48
SDHB-201ENST00000375499 FANCBQ8NB91 859 aa18.03■□□□□ 0.48
SDHB-201ENST00000375499 RRP36Q96EU6 259 aaKnown RBP18.03■□□□□ 0.48
SDHB-201ENST00000375499 IWS1Q96ST2 819 aa18.03■□□□□ 0.48
SDHB-201ENST00000375499 MPHOSPH6Q99547 160 aaKnown RBP18.03■□□□□ 0.48
SDHB-201ENST00000375499 DOCK5Q9H7D0 1870 aa18.03■□□□□ 0.48
SDHB-201ENST00000375499 NKRFO15226 690 aaKnown RBP eCLIP18.02■□□□□ 0.48
SDHB-201ENST00000375499 CALM1P0DP23 149 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 CALM2P0DP24 149 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 CALM3P0DP25 149 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 SMARCA1P28370 1054 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 GNAQP50148 359 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 EPHB4P54760 987 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 PURAQ00577 322 aaKnown RBP18.02■□□□□ 0.48
SDHB-201ENST00000375499 ARHGAP1Q07960 439 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 ITGA7Q13683 1181 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 KRT32Q14532 448 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 TTLL4Q14679 1199 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 GPKOWQ92917 476 aaPredicted RBP eCLIP18.02■□□□□ 0.48
SDHB-201ENST00000375499 JAKMIP1Q96N16 626 aaKnown RBP18.02■□□□□ 0.48
SDHB-201ENST00000375499 LZTS2Q9BRK4 669 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 FAM217BQ9NTX9 383 aaPredicted RBP18.02■□□□□ 0.48
SDHB-201ENST00000375499 TMEM39AQ9NV64 488 aa18.02■□□□□ 0.48
SDHB-201ENST00000375499 VCANP13611 3396 aa18.02■□□□□ 0.47
SDHB-201ENST00000375499 FRMPD4Q14CM0 1322 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 DCDC2CA8MYV0 355 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 B4DLN1 442 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 MEIS2O14770 477 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 CD4P01730 458 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 MYL3P08590 195 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 MYCLP12524 364 aaPredicted RBP18.01■□□□□ 0.47
SDHB-201ENST00000375499 MRPL12P52815 198 aaKnown RBP18.01■□□□□ 0.47
SDHB-201ENST00000375499 FPGSQ05932 587 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 FUT2Q10981 343 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 USP17L6PQ6QN14 398 aa18.01■□□□□ 0.47
SDHB-201ENST00000375499 MAP3K20Q9NYL2 800 aaKnown RBP18.01■□□□□ 0.47
SDHB-201ENST00000375499 DDX41Q9UJV9 622 aaKnown RBP18.01■□□□□ 0.47
SDHB-201ENST00000375499 MROH7Q68CQ1 1323 aa18■□□□□ 0.47
SDHB-201ENST00000375499 KLF18A0A0U1RQI7 1052 aa18■□□□□ 0.47
SDHB-201ENST00000375499 A6NJR5 290 aa18■□□□□ 0.47
SDHB-201ENST00000375499 TNFRSF10AO00220 468 aa18■□□□□ 0.47
SDHB-201ENST00000375499 ZEB2O60315 1214 aa18■□□□□ 0.47
SDHB-201ENST00000375499 B4GALT4O60513 344 aa18■□□□□ 0.47
SDHB-201ENST00000375499 CABYRO75952 493 aa18■□□□□ 0.47
SDHB-201ENST00000375499 CDC27P30260 824 aa18■□□□□ 0.47
SDHB-201ENST00000375499 CPT1AP50416 773 aa18■□□□□ 0.47
SDHB-201ENST00000375499 ERICH6BQ5W0A0 696 aa18■□□□□ 0.47
SDHB-201ENST00000375499 VSIG10LQ86VR7 867 aa18■□□□□ 0.47
SDHB-201ENST00000375499 SAMD3Q8N6K7 520 aa18■□□□□ 0.47
SDHB-201ENST00000375499 AFG1LQ8WV93 481 aa18■□□□□ 0.47
SDHB-201ENST00000375499 SEC63Q9UGP8 760 aaKnown RBP18■□□□□ 0.47
SDHB-201ENST00000375499 UMODL1Q5DID0 1318 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 GOLGA8AA7E2F4 631 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 GOLGA8BA8MQT2 603 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 ZBTB43O43298 467 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 SORBS3O60504 671 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 EIF3JO75822 258 aaKnown RBP17.99■□□□□ 0.47
SDHB-201ENST00000375499 REC8O95072 547 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 CENPBP07199 599 aaPredicted RBP17.99■□□□□ 0.47
SDHB-201ENST00000375499 MMP3P08254 477 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 MRPS9P82933 396 aaKnown RBP17.99■□□□□ 0.47
SDHB-201ENST00000375499 APOBRQ0VD83 1088 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 RTN1Q16799 776 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 TYW1BQ6NUM6 668 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 Q6ZUG5 572 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 ATXN2LQ8WWM7 1075 aaKnown RBP17.99■□□□□ 0.47
SDHB-201ENST00000375499 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 TRPV6Q9H1D0 765 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 MRVI1Q9Y6F6 885 aa17.99■□□□□ 0.47
SDHB-201ENST00000375499 GH1P01241 217 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 SP2Q02086 613 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 TRAF1Q13077 416 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 UBE2SQ16763 222 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 WWC2Q6AWC2 1192 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 MTG1Q9BT17 334 aaPredicted RBP17.98■□□□□ 0.47
SDHB-201ENST00000375499 USP26Q9BXU7 913 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 ZNF576Q9H609 170 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 POLR3EQ9NVU0 708 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 MYO9BQ13459 2157 aa17.98■□□□□ 0.47
SDHB-201ENST00000375499 PRUNE2Q8WUY3 3088 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 PIK3CDO00329 1044 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 TIMP1P01033 207 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 HMGB1P09429 215 aaKnown RBP17.97■□□□□ 0.47
SDHB-201ENST00000375499 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
SDHB-201ENST00000375499 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 DNAJB2P25686 324 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 CCND2P30279 289 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 SEMA3FQ13275 785 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 GRIN2CQ14957 1233 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 SYNE3Q6ZMZ3 975 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 BRF1Q92994 677 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 AGXT2Q9BYV1 514 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 ALDH8A1Q9H2A2 487 aaPredicted RBP17.97■□□□□ 0.47
SDHB-201ENST00000375499 BCAS3Q9H6U6 928 aa17.97■□□□□ 0.47
SDHB-201ENST00000375499 TRMT13Q9NUP7 481 aaKnown RBP17.97■□□□□ 0.47
SDHB-201ENST00000375499 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
SDHB-201ENST00000375499 NCOR1O75376 2440 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms