RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TMEM139Q8IV31 216 aa21.93■■□□□ 1.1
HDAC1-201ENST00000373548 TC2NQ8N9U0 490 aa21.93■■□□□ 1.1
HDAC1-201ENST00000373548 GTPBP4Q9BZE4 634 aaKnown RBP21.93■■□□□ 1.1
HDAC1-201ENST00000373548 CNOT7Q9UIV1 285 aaKnown RBP21.93■■□□□ 1.1
HDAC1-201ENST00000373548 TNNT1P13805 278 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 CIITAP33076 1130 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 PTGER2P43116 358 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 COPB1P53618 953 aaKnown RBP21.92■■□□□ 1.1
HDAC1-201ENST00000373548 TBC1D10BQ4KMP7 808 aaPredicted RBP21.92■■□□□ 1.1
HDAC1-201ENST00000373548 CNNM4Q6P4Q7 775 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 UNC13DQ70J99 1090 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 ZNF341Q9BYN7 854 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 FEM1BQ9UK73 627 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 KDM3AQ9Y4C1 1321 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 UQCRHLA0A096LP55 91 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 PVALEFA0A1B0GWK0 134 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 TBX3O15119 743 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 UQCRHP07919 91 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 SPIRE1Q08AE8 756 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 COBLL1Q53SF7 1204 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 NYAP1Q6ZVC0 841 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 DYMQ7RTS9 669 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 TEX2Q8IWB9 1127 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 KIAA0895Q8NCT3 520 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 TBC1D5Q92609 795 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 HPS3Q969F9 1004 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 TAB2Q9NYJ8 693 aa21.92■■□□□ 1.1
HDAC1-201ENST00000373548 CYP3A4P08684 503 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 STAT3P40763 770 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 ADKP55263 362 aaKnown RBP21.91■■□□□ 1.1
HDAC1-201ENST00000373548 FCHSD1Q86WN1 690 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 TRIM47Q96LD4 638 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 FEZ1Q99689 392 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 DUSP9Q99956 384 aaKnown RBP21.91■■□□□ 1.1
HDAC1-201ENST00000373548 NT5C3AQ9H0P0 336 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 HACL1Q9UJ83 578 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 CFBP00751 764 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 CCNE1P24864 410 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 ANKRD20A12PQ8NF67 263 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 DDX12PQ92771 950 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 P2RX5Q93086 422 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 LRRC27Q9C0I9 530 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 VPS16Q9H269 839 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 THAP9Q9H5L6 903 aa21.91■■□□□ 1.1
HDAC1-201ENST00000373548 PSDA5PKW4 1024 aaPredicted RBP21.9■■□□□ 1.1
HDAC1-201ENST00000373548 N4BP3O15049 544 aa21.9■■□□□ 1.1
HDAC1-201ENST00000373548 SLC26A4O43511 780 aa21.9■■□□□ 1.1
HDAC1-201ENST00000373548 PPP1R2P41236 205 aa21.9■■□□□ 1.1
HDAC1-201ENST00000373548 SAMD1Q6SPF0 538 aaPredicted RBP21.9■■□□□ 1.1
HDAC1-201ENST00000373548 MYRIPQ8NFW9 859 aa21.9■■□□□ 1.1
HDAC1-201ENST00000373548 NLGN2Q8NFZ4 835 aa21.9■■□□□ 1.1
HDAC1-201ENST00000373548 SRRTQ9BXP5 876 aaKnown RBP21.9■■□□□ 1.1
HDAC1-201ENST00000373548 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.9■■□□□ 1.1
HDAC1-201ENST00000373548 INPP5BP32019 993 aa21.89■■□□□ 1.1
HDAC1-201ENST00000373548 SLC39A2Q9NP94 309 aa21.89■■□□□ 1.1
HDAC1-201ENST00000373548 KIAA1024Q9UPX6 916 aa21.89■■□□□ 1.1
HDAC1-201ENST00000373548 ZNF541Q9H0D2 1346 aa21.89■■□□□ 1.1
HDAC1-201ENST00000373548 POTEB3A0JP26 581 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 POTECB2RU33 542 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 GCOM1H8Y6P7 765 aaPredicted RBP21.89■■□□□ 1.09
HDAC1-201ENST00000373548 POLR2MP0CAP2 368 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 KIF4BQ2VIQ3 1234 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 POTEBQ6S5H4 581 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 CYP2W1Q8TAV3 490 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 PPP1R13BQ96KQ4 1090 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 FAM20AQ96MK3 541 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 DEFB129Q9H1M3 183 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 MRPL11Q9Y3B7 192 aaKnown RBP21.89■■□□□ 1.09
HDAC1-201ENST00000373548 ITIH6Q6UXX5 1313 aa21.89■■□□□ 1.09
HDAC1-201ENST00000373548 BICDL2A1A5D9 508 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 E9PMD0 336 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 MSH4O15457 936 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 MED24O75448 989 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 EHHADHQ08426 723 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 PTPN14Q15678 1187 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 ANKRD40Q6AI12 368 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 LDHDQ86WU2 507 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 CREBRFQ8IUR6 639 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 NOC3LQ8WTT2 800 aaKnown RBP21.88■■□□□ 1.09
HDAC1-201ENST00000373548 DNAJC19Q96DA6 116 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 BAG1Q99933 345 aaPredicted RBP21.88■■□□□ 1.09
HDAC1-201ENST00000373548 CTNND1O60716 968 aaKnown RBP21.88■■□□□ 1.09
HDAC1-201ENST00000373548 EEF1GP26641 437 aaKnown RBP21.88■■□□□ 1.09
HDAC1-201ENST00000373548 RBL2Q08999 1139 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 CSGALNACT2Q8N6G5 542 aa21.88■■□□□ 1.09
HDAC1-201ENST00000373548 ABCB11O95342 1321 aa21.87■■□□□ 1.09
HDAC1-201ENST00000373548 IGLV3-22A0A075B6J6 115 aa21.87■■□□□ 1.09
HDAC1-201ENST00000373548 AKR1B15C9JRZ8 316 aaPredicted RBP21.87■■□□□ 1.09
HDAC1-201ENST00000373548 ARHGAP6O43182 974 aa21.87■■□□□ 1.09
HDAC1-201ENST00000373548 IDEP14735 1019 aa21.87■■□□□ 1.09
HDAC1-201ENST00000373548 ZNF76P36508 570 aa21.87■■□□□ 1.09
HDAC1-201ENST00000373548 CEP135Q66GS9 1140 aa21.87■■□□□ 1.09
HDAC1-201ENST00000373548 KIAA1683Q9H0B3 1180 aa21.87■■□□□ 1.09
HDAC1-201ENST00000373548 GINM1Q9NU53 330 aa21.87■■□□□ 1.09
HDAC1-201ENST00000373548 WDR46O15213 610 aaKnown RBP21.86■■□□□ 1.09
HDAC1-201ENST00000373548 NBPF12Q5TAG4 269 aaPredicted RBP21.86■■□□□ 1.09
HDAC1-201ENST00000373548 PPFIBP1Q86W92 1011 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 SEMA6BQ9H3T3 888 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 DOCK1Q14185 1865 aa21.86■■□□□ 1.09
HDAC1-201ENST00000373548 ZNF536O15090 1300 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms