RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 NDUFA8P51970 172 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 TTLL7Q6ZT98 887 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 KIAA0825Q8IV33 1275 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 LRRC43Q8N309 656 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
VCL-202ENST00000372755 SLC38A10Q9HBR0 1119 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 MCF2LO15068 1137 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 ZNF653Q96CK0 615 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 EDC3Q96F86 508 aaKnown RBP12.53□□□□□ -0.4
VCL-202ENST00000372755 CLIC6Q96NY7 704 aa12.53□□□□□ -0.4
VCL-202ENST00000372755 ABCC12Q96J65 1359 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 FGAP02671 866 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 CLTAP09496 248 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 OSBPP22059 807 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 MSH2P43246 934 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 RABGGTAQ92696 567 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 APOL6Q9BWW8 343 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 TMEM206Q9H813 350 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 ABCC4O15439 1325 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 GCFC2P16383 781 aaKnown RBP12.52□□□□□ -0.4
VCL-202ENST00000372755 NR2F2P24468 414 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 ARL4AP40617 200 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 CYP4A11Q02928 519 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 PARD3BQ8TEW8 1205 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 TUBB6Q9BUF5 446 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 EFHD1Q9BUP0 239 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 CDC23Q9UJX2 597 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 AKT3Q9Y243 479 aa12.52□□□□□ -0.4
VCL-202ENST00000372755 RGS12O14924 1447 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 ECEL1O95672 775 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 PDIA3P30101 505 aaKnown RBP12.52□□□□□ -0.41
VCL-202ENST00000372755 EPHB4P54760 987 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
VCL-202ENST00000372755 NAA35Q5VZE5 725 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 RSBN1LQ6PCB5 846 aaPredicted RBP12.52□□□□□ -0.41
VCL-202ENST00000372755 AP5M1Q9H0R1 490 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 DAAM1Q9Y4D1 1078 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 GSTA4O15217 222 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 MX2P20592 715 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 DPP9Q86TI2 863 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 DCLK2Q8N568 766 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 ADD3Q9UEY8 706 aaKnown RBP12.52□□□□□ -0.41
VCL-202ENST00000372755 CLIC4Q9Y696 253 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 F8W8V4 182 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 HSPA6P17066 643 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 ARHGEF18Q6ZSZ5 1173 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 FAM186BQ8IYM0 893 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 RYBPQ8N488 228 aaPredicted RBP12.52□□□□□ -0.41
VCL-202ENST00000372755 KMT5AQ9NQR1 393 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
VCL-202ENST00000372755 LRFN2Q9ULH4 789 aa12.52□□□□□ -0.41
VCL-202ENST00000372755 SHANK2Q9UPX8 1470 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 CASP14P31944 242 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 RASIP1Q5U651 963 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 MRPL47Q9HD33 250 aaKnown RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 PTPRKQ15262 1439 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 ATP8B1O43520 1251 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 FMNL1O95466 1100 aaPredicted RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 KRT1P04264 644 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 P2RX5Q93086 422 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 TLK1Q9UKI8 766 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 MYL1P05976 194 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 SGO2Q562F6 1265 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 MYLK4Q86YV6 388 aaPredicted RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 CXorf38Q8TB03 319 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 RNF26Q9BY78 433 aaPredicted RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 KIF9Q9HAQ2 790 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 ZNF804BA4D1E1 1349 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 LRRD1A4D1F6 860 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 NVLO15381 856 aaKnown RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 ZNF500O60304 480 aaPredicted RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 RCN2Q14257 317 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 SRRM1Q8IYB3 904 aaKnown RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 MID2Q9UJV3 735 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 ZNF215Q9UL58 517 aaPredicted RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 PHKG2P15735 406 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 CCNYQ8ND76 341 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 CDHR1Q96JP9 859 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 XAB2Q9HCS7 855 aaKnown RBP12.51□□□□□ -0.41
VCL-202ENST00000372755 FAM135BQ49AJ0 1406 aa12.51□□□□□ -0.41
VCL-202ENST00000372755 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
VCL-202ENST00000372755 CIAO1O76071 339 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 GPR162Q16538 588 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 MAN2A1Q16706 1144 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 FAM149B1Q96BN6 582 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 MRPL46Q9H2W6 279 aaKnown RBP12.5□□□□□ -0.41
VCL-202ENST00000372755 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 XDHP47989 1333 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 PGRMC1O00264 195 aaKnown RBP12.5□□□□□ -0.41
VCL-202ENST00000372755 TTLL1O95922 423 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 CCND2P30279 289 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 LIG3P49916 1009 aa12.5□□□□□ -0.41
VCL-202ENST00000372755 C10orf76Q5T2E6 689 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms