RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 TOP1MTQ969P6 601 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 ZNF512BQ96KM6 892 aaPredicted RBP9.48□□□□□ -0.89
YIPF3-201ENST00000372417 PRKRIP1Q9H875 184 aaPredicted RBP9.48□□□□□ -0.89
YIPF3-201ENST00000372417 DCP1AQ9NPI6 582 aaPredicted RBP9.48□□□□□ -0.89
YIPF3-201ENST00000372417 BARX2Q9UMQ3 279 aaPredicted RBP9.48□□□□□ -0.89
YIPF3-201ENST00000372417 MIA3Q5JRA6 1907 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 RALGAPA1Q6GYQ0 2036 aa9.48□□□□□ -0.89
YIPF3-201ENST00000372417 RBM47A0AV96 593 aaKnown RBP9.47□□□□□ -0.89
YIPF3-201ENST00000372417 F5H6K3 240 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 RBAK-RBAKDNI3L0D1 243 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 SDHBP21912 280 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 BMPR1AP36894 532 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 CDK8P49336 464 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 KLRC3Q07444 240 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 PPP2R5BQ15173 497 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 TKFCQ3LXA3 575 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 ZNF618Q5T7W0 954 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 TRAF7Q6Q0C0 670 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 CYP2W1Q8TAV3 490 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 SUSD6Q92537 303 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 IFIH1Q9BYX4 1025 aaKnown RBP9.47□□□□□ -0.89
YIPF3-201ENST00000372417 FEM1BQ9UK73 627 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 SORCS3Q9UPU3 1222 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 DENND4AQ7Z401 1863 aa9.47□□□□□ -0.89
YIPF3-201ENST00000372417 MYH6P13533 1939 aa9.46□□□□□ -0.89
YIPF3-201ENST00000372417 ZFYVE26Q68DK2 2539 aa9.46□□□□□ -0.89
YIPF3-201ENST00000372417 GCN1Q92616 2671 aaKnown RBP9.46□□□□□ -0.89
YIPF3-201ENST00000372417 BRD1O95696 1058 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 GLP2RO95838 553 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 FDX1P10109 184 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 DDX10Q13206 875 aaKnown RBP9.46□□□□□ -0.9
YIPF3-201ENST00000372417 PTK7Q13308 1070 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 MTX1Q13505 466 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 TNNI3KQ59H18 835 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 C16orf86Q6ZW13 317 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 ADGRD2Q7Z7M1 963 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 CCDC105Q8IYK2 499 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 RUBCNQ92622 972 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 IL17RAQ96F46 866 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 TRERF1Q96PN7 1200 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 GPR108Q9NPR9 543 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.9
YIPF3-201ENST00000372417 CYP39A1Q9NYL5 469 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 GTF2IRD1Q9UHL9 959 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 FPGT-TNNI3KV9GXZ4 949 aa9.46□□□□□ -0.9
YIPF3-201ENST00000372417 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
YIPF3-201ENST00000372417 ADRB1P08588 477 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 LINC00271P0C7V0 271 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 ALAS1P13196 640 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 HOXB3P14651 431 aaPredicted RBP9.45□□□□□ -0.9
YIPF3-201ENST00000372417 SP100P23497 879 aaPredicted RBP9.45□□□□□ -0.9
YIPF3-201ENST00000372417 NRIP1P48552 1158 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 TRIM71Q2Q1W2 868 aaKnown RBP9.45□□□□□ -0.9
YIPF3-201ENST00000372417 PLEKHG4Q58EX7 1191 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 CWF19L1Q69YN2 538 aaKnown RBP9.45□□□□□ -0.9
YIPF3-201ENST00000372417 AMOTL1Q8IY63 956 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 LRRC47Q8N1G4 583 aaKnown RBP9.45□□□□□ -0.9
YIPF3-201ENST00000372417 FLCNQ8NFG4 579 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 SSH1Q8WYL5 1049 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 SEPT8Q92599 483 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 COPS5Q92905 334 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 MEIS3Q99687 375 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 ADD3Q9UEY8 706 aaKnown RBP9.45□□□□□ -0.9
YIPF3-201ENST00000372417 NR2E1Q9Y466 385 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 R4GN57 208 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 ADGRA3Q8IWK6 1321 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 CACNA1IQ9P0X4 2223 aa9.45□□□□□ -0.9
YIPF3-201ENST00000372417 FRYQ5TBA9 3013 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 LOC102724159A0A0B4J2E5 919 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 ALDH5A1P51649 535 aaPredicted RBP9.44□□□□□ -0.9
YIPF3-201ENST00000372417 ATXN1P54253 815 aaKnown RBP9.44□□□□□ -0.9
YIPF3-201ENST00000372417 PDE4BQ07343 736 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 CAMK1Q14012 370 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 PWP2Q15269 919 aaKnown RBP9.44□□□□□ -0.9
YIPF3-201ENST00000372417 NSMFQ6X4W1 530 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 RBM23Q86U06 439 aaKnown RBP9.44□□□□□ -0.9
YIPF3-201ENST00000372417 LCORLQ8N3X6 602 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 DCLK2Q8N568 766 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 C7orf31Q8N865 590 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 DTWD2Q8NBA8 298 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 CLP1Q92989 425 aaKnown RBP9.44□□□□□ -0.9
YIPF3-201ENST00000372417 WNT8BQ93098 351 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 PURBQ96QR8 312 aaKnown RBP9.44□□□□□ -0.9
YIPF3-201ENST00000372417 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 ANTXR1Q9H6X2 564 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 NYAP2Q9P242 653 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 HDAC6Q9UBN7 1215 aa9.44□□□□□ -0.9
YIPF3-201ENST00000372417 PATJQ8NI35 1801 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 CYP2D7A0A087X1C5 515 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.43□□□□□ -0.9
YIPF3-201ENST00000372417 RSPH10B2B2RC85 870 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 MMP3P08254 477 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 RSPH10BP0C881 870 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 AOC1P19801 751 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 DMWDQ09019 674 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 MUM1L1Q5H9M0 696 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 C12orf60Q5U649 245 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 ZC3H14Q6PJT7 736 aaKnown RBP9.43□□□□□ -0.9
YIPF3-201ENST00000372417 SCFD2Q8WU76 684 aa9.43□□□□□ -0.9
YIPF3-201ENST00000372417 KAT2BQ92831 832 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms