RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PIGSQ96S52 555 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 IPO11Q9UI26 975 aaKnown RBP19.76■□□□□ 0.75
SNX27-202ENST00000368841 ASAP1Q9ULH1 1129 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 GOLGA8KD6RF30 607 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 FAM133BQ5BKY9 247 aaKnown RBP19.76■□□□□ 0.75
SNX27-202ENST00000368841 UBE2Q2Q8WVN8 375 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 ZWILCHQ9H900 591 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 SFI1A8K8P3 1242 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 TOM1L1O75674 476 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 PDCD7Q8N8D1 485 aaKnown RBP19.75■□□□□ 0.75
SNX27-202ENST00000368841 COPB1P53618 953 aaKnown RBP19.75■□□□□ 0.75
SNX27-202ENST00000368841 BASP1P80723 227 aaKnown RBP19.75■□□□□ 0.75
SNX27-202ENST00000368841 UBE2TQ9NPD8 197 aaPredicted RBP19.75■□□□□ 0.75
SNX27-202ENST00000368841 NOC2LQ9Y3T9 749 aaKnown RBP19.75■□□□□ 0.75
SNX27-202ENST00000368841 GSTA4O15217 222 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 PHEXP78562 749 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 PHKG2P15735 406 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 DCAF15Q66K64 600 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 COL4A3BPQ9Y5P4 624 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 KCTD2Q14681 263 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 ADCK5Q3MIX3 580 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 DARS2Q6PI48 645 aaKnown RBP19.75■□□□□ 0.75
SNX27-202ENST00000368841 ANGPTL8Q6UXH0 198 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 ZSCAN26Q16670 478 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 MIS18BP1Q6P0N0 1132 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 PI16Q6UXB8 463 aa19.75■□□□□ 0.75
SNX27-202ENST00000368841 ABT1Q9ULW3 272 aaKnown RBP19.75■□□□□ 0.75
SNX27-202ENST00000368841 PIK3C2GO75747 1445 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 NR2F2P24468 414 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 MFAP3P55082 362 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 SLC7A5Q01650 507 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 PDZD4Q76G19 769 aaPredicted RBP19.74■□□□□ 0.75
SNX27-202ENST00000368841 CPP00450 1065 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 FAM26FQ5R3K3 315 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 SLC35F6Q8N357 371 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.74■□□□□ 0.75
SNX27-202ENST00000368841 FGD4Q96M96 766 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 TSPYL2Q9H2G4 693 aaPredicted RBP19.74■□□□□ 0.75
SNX27-202ENST00000368841 SOS2Q07890 1332 aaPredicted RBP19.74■□□□□ 0.75
SNX27-202ENST00000368841 TRPA1O75762 1119 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 ASPHQ12797 758 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 WHAMMP3Q1A5X7 153 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 SZRD1Q7Z422 152 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 AP5M1Q9H0R1 490 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 ZBBXA8MT70 800 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 MYL3P08590 195 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 PDIA3P30101 505 aaKnown RBP19.74■□□□□ 0.75
SNX27-202ENST00000368841 ZNF710Q8N1W2 664 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 SDCCAG3Q96C92 435 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 IWS1Q96ST2 819 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 CALN1Q9BXU9 219 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 SLAIN2Q9P270 581 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 SSTR3P32745 418 aaPredicted RBP19.74■□□□□ 0.75
SNX27-202ENST00000368841 KIAA1841Q6NSI8 718 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 MAGOHBQ96A72 148 aaKnown RBP19.74■□□□□ 0.75
SNX27-202ENST00000368841 LMNB1P20700 586 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 USP17L2Q6R6M4 530 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 ANTXR1Q9H6X2 564 aa19.74■□□□□ 0.75
SNX27-202ENST00000368841 MGEA5O60502 916 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 N4BP1O75113 896 aaKnown RBP19.73■□□□□ 0.75
SNX27-202ENST00000368841 ZNF18P17022 549 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 PTK2Q05397 1052 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 NSUN2Q08J23 767 aaKnown RBP eCLIP19.73■□□□□ 0.75
SNX27-202ENST00000368841 METTL23Q86XA0 190 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 PPP1R13BQ96KQ4 1090 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 ATP8A1Q9Y2Q0 1164 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 GTPBP6O43824 516 aaPredicted RBP19.73■□□□□ 0.75
SNX27-202ENST00000368841 ZNF589Q86UQ0 364 aaPredicted RBP19.73■□□□□ 0.75
SNX27-202ENST00000368841 STAG1Q8WVM7 1258 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 PPWD1Q96BP3 646 aaKnown RBP19.73■□□□□ 0.75
SNX27-202ENST00000368841 YEATS2Q9ULM3 1422 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 OSBPP22059 807 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 CCND2P30279 289 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 CCT5P48643 541 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 DEPDC1BQ8WUY9 529 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 ZNF274Q96GC6 653 aaPredicted RBP19.73■□□□□ 0.75
SNX27-202ENST00000368841 PYCARDQ9ULZ3 195 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 SOX5P35711 763 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 CEP170P1Q96L14 293 aa19.73■□□□□ 0.75
SNX27-202ENST00000368841 CTTNBP2Q8WZ74 1663 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 PFKFB2O60825 505 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 KRT33BQ14525 404 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 SMAP1Q8IYB5 467 aaPredicted RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 AP1M1Q9BXS5 423 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 USP17L8P0C7I0 530 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 TFDP1Q14186 410 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 MARCH10Q8NA82 808 aaPredicted RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 PSPC1Q8WXF1 523 aaKnown RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 PASKQ96RG2 1323 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 ARHGAP4P98171 946 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 CTTNQ14247 550 aaKnown RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 ZNF668Q96K58 619 aaPredicted RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 HEXIM2Q96MH2 286 aaKnown RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 TUBGCP2Q9BSJ2 902 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 SART1O43290 800 aaKnown RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 GPC4O75487 556 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 ZNF445P59923 1031 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 OR6B2Q6IFH4 312 aa19.72■□□□□ 0.75
SNX27-202ENST00000368841 RWDD4Q6NW29 188 aaKnown RBP19.72■□□□□ 0.75
SNX27-202ENST00000368841 ACRBPQ8NEB7 543 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms