RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 E4F1Q66K89 784 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 ZNF131P52739 623 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 RASGRP2Q7LDG7 609 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 CYP2C19P33261 490 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 COG1Q8WTW3 980 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 TBC1D31Q96DN5 1066 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 CEP72Q9P209 647 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 CHMP2AO43633 222 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 TBC1D8O95759 1140 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 TTLL1O95922 423 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 SLC8A3P57103 927 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 HAUS1Q96CS2 278 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 EPSTI1Q96J88 318 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 OTUD6AQ7L8S5 288 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 SLAIN2Q9P270 581 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 PCDHA1Q9Y5I3 950 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 FMN2Q9NZ56 1722 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 NOL3O60936 208 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 ATF2P15336 505 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 RFX1P22670 979 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 DHX9Q08211 1270 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 C6orf118Q5T5N4 469 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 A0A087WWV3 80 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 CTNND1O60716 968 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 AMNQ9BXJ7 453 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 MIF4GDA9UHW6 222 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 PFKFB3Q16875 520 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 TUBB6Q9BUF5 446 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 CEMIPQ8WUJ3 1361 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 PVALEFA0A1B0GWK0 134 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 USP14P54578 494 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 JAG2Q9Y219 1238 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 P4HA1P13674 534 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 ADCY8P40145 1251 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 ARHGEF18Q6ZSZ5 1173 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 LCORLQ8N3X6 602 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
CDC42BPA-202ENST00000366764 KIF3CO14782 793 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 RHOT2Q8IXI1 618 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 ATP2B4P23634 1241 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 RAD51AP2Q09MP3 1159 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 TRIM42Q8IWZ5 723 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 MRPL11Q9Y3B7 192 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 PSMC2P35998 433 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 MUM1L1Q5H9M0 696 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 KCTD16Q68DU8 428 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 TPH2Q8IWU9 490 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 ABCB4P21439 1286 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 DMP1Q13316 513 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 PRR16Q569H4 304 aa12.85□□□□□ -0.35
CDC42BPA-202ENST00000366764 GOLGA8FQ08AF8 430 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 GOLGA8DPQ0D2H9 430 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 CCDC13Q8IYE1 715 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 ANKRD35Q8N283 1001 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 PODXLO00592 558 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 WDR24Q96S15 920 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 ODF2LQ9ULJ1 636 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 MYH15Q9Y2K3 1946 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 PRPF6O94906 941 aaKnown RBP12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 TOM1O60784 492 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 ATP5HO75947 161 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 CPS1P31327 1500 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 CLTAP09496 248 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 MUM1Q2TAK8 710 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 METTL16Q86W50 562 aaKnown RBP12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 BSDC1Q9NW68 430 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 CYP2J2P51589 502 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 MICAL1Q8TDZ2 1067 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 FBXO41Q8TF61 875 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 WDR11Q9BZH6 1224 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 CAPN11Q9UMQ6 739 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 DIP2BQ9P265 1576 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 MYL7Q01449 175 aa12.84□□□□□ -0.35
CDC42BPA-202ENST00000366764 USP27XA6NNY8 438 aa12.83□□□□□ -0.35
CDC42BPA-202ENST00000366764 CHUKO15111 745 aa12.83□□□□□ -0.35
CDC42BPA-202ENST00000366764 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.35
CDC42BPA-202ENST00000366764 MAP7Q14244 749 aa12.83□□□□□ -0.35
CDC42BPA-202ENST00000366764 TBC1D10CQ8IV04 446 aa12.83□□□□□ -0.35
CDC42BPA-202ENST00000366764 TFCP2L1Q9NZI6 479 aa12.83□□□□□ -0.35
CDC42BPA-202ENST00000366764 LIMA1Q9UHB6 759 aaKnown RBP12.83□□□□□ -0.35
CDC42BPA-202ENST00000366764 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
CDC42BPA-202ENST00000366764 Q9H521 79 aa12.83□□□□□ -0.36
CDC42BPA-202ENST00000366764 RAB20Q9NX57 234 aa12.83□□□□□ -0.36
CDC42BPA-202ENST00000366764 CAV1Q03135 178 aa12.83□□□□□ -0.36
CDC42BPA-202ENST00000366764 SHC4Q6S5L8 630 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms