RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 CLEC10AQ8IUN9 316 aa23.01■■□□□ 1.27
TRIM3-202ENST00000359518 TSEN2Q8NCE0 465 aaKnown RBP23.01■■□□□ 1.27
TRIM3-202ENST00000359518 CEP95Q96GE4 821 aa23.01■■□□□ 1.27
TRIM3-202ENST00000359518 PNMA5Q96PV4 448 aa23.01■■□□□ 1.27
TRIM3-202ENST00000359518 A0A1W2PQJ5 194 aa23■■□□□ 1.27
TRIM3-202ENST00000359518 CCT5P48643 541 aa23■■□□□ 1.27
TRIM3-202ENST00000359518 LARP4BQ92615 738 aaKnown RBP23■■□□□ 1.27
TRIM3-202ENST00000359518 RBM12Q9NTZ6 932 aaKnown RBP23■■□□□ 1.27
TRIM3-202ENST00000359518 SCN7AQ01118 1682 aa23■■□□□ 1.27
TRIM3-202ENST00000359518 ZSCAN5CA6NGD5 496 aaPredicted RBP23■■□□□ 1.27
TRIM3-202ENST00000359518 SPATA31A1Q5TZJ5 1347 aa23■■□□□ 1.27
TRIM3-202ENST00000359518 ALS2CR12Q96Q35 445 aa23■■□□□ 1.27
TRIM3-202ENST00000359518 MAN2A1Q16706 1144 aa23■■□□□ 1.27
TRIM3-202ENST00000359518 MAGEF1Q9HAY2 307 aa23■■□□□ 1.27
TRIM3-202ENST00000359518 FIGNQ5HY92 759 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 SLC10A5Q5PT55 438 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 KCTD16Q68DU8 428 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 SNX29Q8TEQ0 813 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 PACSIN2Q9UNF0 486 aaPredicted RBP22.99■■□□□ 1.27
TRIM3-202ENST00000359518 CDK17Q00537 523 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 CACNB1Q02641 598 aaPredicted RBP22.99■■□□□ 1.27
TRIM3-202ENST00000359518 MMGT1Q8N4V1 131 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 DDX12PQ92771 950 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 ARL8AQ96BM9 186 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 HYOU1Q9Y4L1 999 aa22.99■■□□□ 1.27
TRIM3-202ENST00000359518 TNNI2P48788 182 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 GOLGB1Q14789 3259 aaKnown RBP22.98■■□□□ 1.27
TRIM3-202ENST00000359518 BTDP43251 543 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 IRAK1P51617 712 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 PTPROQ16827 1216 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 IFT81Q8WYA0 676 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 SPZ1Q9BXG8 430 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 TLR10Q9BXR5 811 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 KIAA1551Q9HCM1 1747 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 FTCDO95954 541 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 PAFAH1B1P43034 410 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 HAUS3Q68CZ6 603 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 UNC13DQ70J99 1090 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 NELFCDQ8IXH7 590 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 LRRC47Q8N1G4 583 aaKnown RBP22.98■■□□□ 1.27
TRIM3-202ENST00000359518 BAP1Q92560 729 aa22.98■■□□□ 1.27
TRIM3-202ENST00000359518 CASZ1Q86V15 1759 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 TRAF5O00463 557 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 C8orf74Q6P047 294 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 TPTE2Q6XPS3 522 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 PACS2Q86VP3 889 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 TEX11Q8IYF3 940 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 SH2D3CQ8N5H7 860 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 WDR66Q8TBY9 1149 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 UBE2SQ16763 222 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 CCDC84Q86UT8 332 aaPredicted RBP22.97■■□□□ 1.27
TRIM3-202ENST00000359518 AMIGO3Q86WK7 504 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 GPCPD1Q9NPB8 672 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 STIM2Q9P246 746 aa22.97■■□□□ 1.27
TRIM3-202ENST00000359518 GNPATO15228 680 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 HNRNPH3P31942 346 aaKnown RBP22.96■■□□□ 1.27
TRIM3-202ENST00000359518 CCDC40Q4G0X9 1142 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 FGFBP2Q9BYJ0 223 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 MARCH6O60337 910 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 TCP1P17987 556 aaKnown RBP22.96■■□□□ 1.27
TRIM3-202ENST00000359518 TM4SF1P30408 202 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 GNGT1P63211 74 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 ECM1Q16610 540 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 RUFY1Q96T51 708 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 LZTS2Q9BRK4 669 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.96■■□□□ 1.27
TRIM3-202ENST00000359518 LAMB1P07942 1786 aa22.96■■□□□ 1.27
TRIM3-202ENST00000359518 KRT14P02533 472 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 MAGEA9P43362 315 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 ATP1A2P50993 1020 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 KCNMA1Q12791 1236 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 KLHDC7AQ5VTJ3 777 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 LRRC55Q6ZSA7 311 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 DNAAF5Q86Y56 855 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 BCAS4Q8TDM0 211 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 CAPS2Q9BXY5 557 aa22.95■■□□□ 1.27
TRIM3-202ENST00000359518 MYH1P12882 1939 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 CORO7P57737 925 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 POLR2FP61218 127 aaKnown RBP22.95■■□□□ 1.26
TRIM3-202ENST00000359518 MTMR9Q96QG7 549 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 NYXQ9GZU5 481 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 SAMM50Q9Y512 469 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 CARSP49589 748 aaKnown RBP22.95■■□□□ 1.26
TRIM3-202ENST00000359518 GUCY2FP51841 1108 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 TMEM266Q2M3C6 531 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 PDXDC1Q6P996 788 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 NOX5Q96PH1 765 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 NFU1Q9UMS0 254 aa22.95■■□□□ 1.26
TRIM3-202ENST00000359518 GLI1P08151 1106 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 TRADDQ15628 312 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 KRT79Q5XKE5 535 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 GUF1Q8N442 669 aaKnown RBP22.94■■□□□ 1.26
TRIM3-202ENST00000359518 EDIL3O43854 480 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 FAM153BP0C7A2 387 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 PPP1R2P41236 205 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 FAM153CQ494X1 144 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 RAD54LQ92698 747 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 ZHX3Q9H4I2 956 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 FAM153AQ9UHL3 310 aa22.94■■□□□ 1.26
TRIM3-202ENST00000359518 CDCA7Q9BWT1 371 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms