RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 PACSIN2Q9UNF0 486 aaPredicted RBP12.05□□□□□ -0.48
RPE-202ENST00000359429 MYO1FO00160 1098 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 LAD1O00515 517 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 TLR2O60603 784 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 HEXIM1O94992 359 aaKnown RBP12.05□□□□□ -0.48
RPE-202ENST00000359429 FNTAP49354 379 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 RNASE9P60153 205 aaKnown RBP12.05□□□□□ -0.48
RPE-202ENST00000359429 SBK1Q52WX2 424 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 PARP10Q53GL7 1025 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 TMED8Q6PL24 325 aaPredicted RBP12.05□□□□□ -0.48
RPE-202ENST00000359429 SLC44A5Q8NCS7 719 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 CELF1Q92879 486 aaKnown RBP12.05□□□□□ -0.48
RPE-202ENST00000359429 NLRC4Q9NPP4 1024 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 ATP8A2Q9NTI2 1148 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 BTG4Q9NY30 223 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 ARPP21Q9UBL0 812 aaPredicted RBP12.05□□□□□ -0.48
RPE-202ENST00000359429 CAPN7Q9Y6W3 813 aa12.05□□□□□ -0.48
RPE-202ENST00000359429 COL22A1Q8NFW1 1626 aaPredicted RBP12.04□□□□□ -0.48
RPE-202ENST00000359429 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 FTCDO95954 541 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 LSP1P33241 339 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 SEC24CP53992 1094 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 NAP1L1P55209 391 aaKnown RBP12.04□□□□□ -0.48
RPE-202ENST00000359429 LRRC41Q15345 812 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 MAN2A1Q16706 1144 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 ERFEQ4G0M1 354 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 CNNM4Q6P4Q7 775 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 PDXDC1Q6P996 788 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 FBXO33Q7Z6M2 555 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 DGKHQ86XP1 1220 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 CASKIN2Q8WXE0 1202 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
RPE-202ENST00000359429 AK8Q96MA6 479 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 MAGEF1Q9HAY2 307 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 A0A1B0GUL6 1792 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 A0A0G2JS52 829 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 GRB10Q13322 594 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 SWT1Q5T5J6 900 aaKnown RBP12.04□□□□□ -0.48
RPE-202ENST00000359429 CFAP58Q5T655 872 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 LRRC55Q6ZSA7 311 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 NOX5Q96PH1 765 aa12.04□□□□□ -0.48
RPE-202ENST00000359429 MYH10P35580 1976 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 LOC102724159A0A0B4J2E5 919 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 PALMO75781 387 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 PWP2Q15269 919 aaKnown RBP12.03□□□□□ -0.48
RPE-202ENST00000359429 CFAP221Q4G0U5 840 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 COBLL1Q53SF7 1204 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 NAA35Q5VZE5 725 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 KDM7AQ6ZMT4 941 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 IFT20Q8IY31 132 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 CNPY4Q8N129 248 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 PNMA5Q96PV4 448 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 CEP89Q96ST8 783 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 KRT12Q99456 494 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 BSDC1Q9NW68 430 aaPredicted RBP12.03□□□□□ -0.48
RPE-202ENST00000359429 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
RPE-202ENST00000359429 NOL4O94818 638 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 KLRC1P26715 233 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 TXKP42681 527 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 ITPK1Q13572 414 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 GLE1Q53GS7 698 aaKnown RBP12.03□□□□□ -0.48
RPE-202ENST00000359429 TDRD12Q587J7 1177 aaKnown RBP12.03□□□□□ -0.48
RPE-202ENST00000359429 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 PRPF38AQ8NAV1 312 aaKnown RBP12.03□□□□□ -0.48
RPE-202ENST00000359429 ZMYND12Q9H0C1 365 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 KANSL2Q9H9L4 492 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 GEMIN8Q9NWZ8 242 aaKnown RBP12.03□□□□□ -0.48
RPE-202ENST00000359429 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
RPE-202ENST00000359429 MEFVO15553 781 aaPredicted RBP12.02□□□□□ -0.48
RPE-202ENST00000359429 ATP6V1AP38606 617 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 MNAT1P51948 309 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 NAPAP54920 295 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 AMPD3Q01432 767 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 CACNA2D4Q7Z3S7 1137 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 CCDC84Q86UT8 332 aaPredicted RBP12.02□□□□□ -0.48
RPE-202ENST00000359429 TBCKQ8TEA7 893 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 ANKS1AQ92625 1134 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 NCAPGQ9BPX3 1015 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 TMEM47Q9BQJ4 181 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 PACSIN1Q9BY11 444 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 EPN3Q9H201 632 aa12.02□□□□□ -0.48
RPE-202ENST00000359429 TAF1P21675 1872 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 RBAK-RBAKDNI3L0D1 243 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 NR1D1P20393 614 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 NONOQ15233 471 aaKnown RBP eCLIP12.02□□□□□ -0.49
RPE-202ENST00000359429 GALNT17Q6IS24 598 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 UNC13DQ70J99 1090 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 SV2BQ7L1I2 683 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 KCNK18Q7Z418 384 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 TXNRD3Q86VQ6 643 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 RNF10Q8N5U6 811 aaKnown RBP12.02□□□□□ -0.49
RPE-202ENST00000359429 PROCA1Q8NCQ7 364 aaPredicted RBP12.02□□□□□ -0.49
RPE-202ENST00000359429 IQCDQ96DY2 449 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 TMEM260Q9NX78 707 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 RREB1Q92766 1687 aa12.02□□□□□ -0.49
RPE-202ENST00000359429 SSU72P8A0A1W2PR75 194 aa12.01□□□□□ -0.49
RPE-202ENST00000359429 RAD51CO43502 376 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms