RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 MAF1Q9H063 256 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 GPCPD1Q9NPB8 672 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 PRKAG3Q9UGI9 489 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 WDR19Q8NEZ3 1342 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 PTPRSQ13332 1948 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 ARIH2O95376 493 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 CTDSPL2Q05D32 466 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 PTK7Q13308 1070 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 DGKDQ16760 1214 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 TSHZ3Q63HK5 1081 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 KAT2BQ92831 832 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 FBXL18Q96ME1 805 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 SAMD11Q96NU1 681 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 C17orf80Q9BSJ5 609 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 KATNAL1Q9BW62 490 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 UPF3BQ9BZI7 483 aaKnown RBP18.65■□□□□ 0.58
IFT20-202ENST00000357896 INCENPQ9NQS7 918 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 ANAPC4Q9UJX5 808 aa18.65■□□□□ 0.58
IFT20-202ENST00000357896 TRIP12Q14669 1992 aaPredicted RBP18.64■□□□□ 0.58
IFT20-202ENST00000357896 ORC4O43929 436 aa18.64■□□□□ 0.57
IFT20-202ENST00000357896 AMHP03971 560 aa18.64■□□□□ 0.57
IFT20-202ENST00000357896 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
IFT20-202ENST00000357896 TMEM47Q9BQJ4 181 aa18.64■□□□□ 0.57
IFT20-202ENST00000357896 HDAC6Q9UBN7 1215 aa18.64■□□□□ 0.57
IFT20-202ENST00000357896 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
IFT20-202ENST00000357896 EMSYQ7Z589 1322 aa18.64■□□□□ 0.57
IFT20-202ENST00000357896 WDFY4Q6ZS81 3184 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 H3BQ06 376 aaPredicted RBP18.63■□□□□ 0.57
IFT20-202ENST00000357896 LGR5O75473 907 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 HTRA4P83105 476 aaPredicted RBP18.63■□□□□ 0.57
IFT20-202ENST00000357896 ARHGAP1Q07960 439 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 LY6KQ17RY6 165 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 TCTN1Q2MV58 587 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 SEPT14Q6ZU15 432 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 CHST3Q7LGC8 479 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 BANK1Q8NDB2 785 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 PABPC5Q96DU9 382 aaKnown RBP18.63■□□□□ 0.57
IFT20-202ENST00000357896 MFSD14AQ96MC6 490 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 FSD1Q9BTV5 496 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 SIP14410 1827 aa18.63■□□□□ 0.57
IFT20-202ENST00000357896 FGRP09769 529 aa18.62■□□□□ 0.57
IFT20-202ENST00000357896 PSEN2P49810 448 aa18.62■□□□□ 0.57
IFT20-202ENST00000357896 STXBP2Q15833 593 aa18.62■□□□□ 0.57
IFT20-202ENST00000357896 EPC2Q52LR7 807 aa18.62■□□□□ 0.57
IFT20-202ENST00000357896 ZNF618Q5T7W0 954 aa18.62■□□□□ 0.57
IFT20-202ENST00000357896 SP7Q8TDD2 431 aaPredicted RBP18.62■□□□□ 0.57
IFT20-202ENST00000357896 NSUN6Q8TEA1 469 aaKnown RBP18.62■□□□□ 0.57
IFT20-202ENST00000357896 TCP11L1Q9NUJ3 509 aa18.62■□□□□ 0.57
IFT20-202ENST00000357896 TTC41PQ6P2S7 1318 aa18.62■□□□□ 0.57
IFT20-202ENST00000357896 H3BNC9 293 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 NCK2O43639 380 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 PDHBP11177 359 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 ZP2Q05996 745 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 LAMC2Q13753 1193 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.61■□□□□ 0.575e-8■■■□□ 17
IFT20-202ENST00000357896 ADHFE1Q8IWW8 467 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 MYOCDQ8IZQ8 938 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 EMID1Q96A84 441 aaPredicted RBP18.61■□□□□ 0.57
IFT20-202ENST00000357896 SNX27Q96L92 541 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 IWS1Q96ST2 819 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 DCTPP1Q9H773 170 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 TOMM22Q9NS69 142 aa18.61■□□□□ 0.57
IFT20-202ENST00000357896 C19orf67A6NJJ6 358 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 ZNF543Q08ER8 600 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 GPM6BQ13491 265 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 MFSD10Q14728 455 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 COL19A1Q14993 1142 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 KIAA0753Q2KHM9 967 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 TRIM71Q2Q1W2 868 aaKnown RBP18.6■□□□□ 0.57
IFT20-202ENST00000357896 TRAF7Q6Q0C0 670 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 EP400NLQ6ZTU2 488 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 TTC14Q96N46 770 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
IFT20-202ENST00000357896 DDX41Q9UJV9 622 aaKnown RBP18.6■□□□□ 0.57
IFT20-202ENST00000357896 FOXP2O15409 715 aa18.59■□□□□ 0.57
IFT20-202ENST00000357896 F2P00734 622 aa18.59■□□□□ 0.57
IFT20-202ENST00000357896 MBTPS1Q14703 1052 aa18.59■□□□□ 0.57
IFT20-202ENST00000357896 USH1GQ495M9 461 aa18.59■□□□□ 0.57
IFT20-202ENST00000357896 TCEAL5Q5H9L2 206 aa18.59■□□□□ 0.57
IFT20-202ENST00000357896 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
IFT20-202ENST00000357896 DBF4BQ8NFT6 615 aa18.59■□□□□ 0.57
IFT20-202ENST00000357896 PPTC7Q8NI37 304 aa18.59■□□□□ 0.57
IFT20-202ENST00000357896 YME1L1Q96TA2 773 aa18.59■□□□□ 0.57
IFT20-202ENST00000357896 POP1Q99575 1024 aaKnown RBP18.59■□□□□ 0.57
IFT20-202ENST00000357896 NSUN3Q9H649 340 aaKnown RBP18.59■□□□□ 0.57
IFT20-202ENST00000357896 RSPH10B2B2RC85 870 aa18.58■□□□□ 0.56
IFT20-202ENST00000357896 HAS3O00219 553 aa18.58■□□□□ 0.56
IFT20-202ENST00000357896 EIF3JO75822 258 aaKnown RBP18.58■□□□□ 0.56
IFT20-202ENST00000357896 RSPH10BP0C881 870 aa18.58■□□□□ 0.56
IFT20-202ENST00000357896 MKRN4PQ13434 485 aaPredicted RBP18.58■□□□□ 0.56
IFT20-202ENST00000357896 RRP12Q5JTH9 1297 aaKnown RBP18.58■□□□□ 0.56
IFT20-202ENST00000357896 GPATCH4Q5T3I0 446 aaKnown RBP18.58■□□□□ 0.56
IFT20-202ENST00000357896 HFE2Q6ZVN8 426 aa18.58■□□□□ 0.56
IFT20-202ENST00000357896 MCF2L2Q86YR7 1114 aa18.58■□□□□ 0.56
IFT20-202ENST00000357896 TMEM192Q8IY95 271 aa18.58■□□□□ 0.56
IFT20-202ENST00000357896 RMDN3Q96TC7 470 aa18.58■□□□□ 0.56
IFT20-202ENST00000357896 PPFIA4O75335 1185 aa18.57■□□□□ 0.56
IFT20-202ENST00000357896 SNHG28P0DPA3 235 aa18.57■□□□□ 0.56
IFT20-202ENST00000357896 THPOP40225 353 aa18.57■□□□□ 0.56
IFT20-202ENST00000357896 ALX1Q15699 326 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms