RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SNX1Q13596 522 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 PODNQ7Z5L7 613 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 MYOCDQ8IZQ8 938 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 PBKQ96KB5 322 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 SERPINI1Q99574 410 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 DESI2Q9BSY9 194 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 PAIP2BQ9ULR5 123 aaKnown RBP12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 ARPP19P56211 112 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 CAPRIN2Q6IMN6 1127 aaKnown RBP12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 DNAAF3Q8N9W5 541 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 CCNYQ8ND76 341 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 TCP10L2B9ZVM9 353 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 POLR2FP61218 127 aaKnown RBP12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 FAM173BQ6P4H8 233 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 FBXL13Q8NEE6 735 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 CFAP36Q96G28 342 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 USP40Q9NVE5 1235 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 LRFN2Q9ULH4 789 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 ACTN1P12814 892 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 TFAP4Q01664 338 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 NNTQ13423 1086 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 SLFN12Q8IYM2 578 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 SLC38A10Q9HBR0 1119 aa12.45□□□□□ -0.42
SPTBN1-202ENST00000356805 CPP00450 1065 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 MYCP01106 439 aaPredicted RBP12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 CHGBP05060 677 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 ARMCX5Q6P1M9 558 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 SYNDIG1LA6NDD5 238 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 ADCY2Q08462 1091 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 KRT40Q6A162 431 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 OSBPL9Q96SU4 736 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 ART3Q13508 389 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 C6orf118Q5T5N4 469 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 LRRC47Q8N1G4 583 aaKnown RBP12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 MAPK13O15264 365 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 RNMTO43148 476 aaKnown RBP12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 GDAP1Q8TB36 358 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 DAAM1Q9Y4D1 1078 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 SOX5P35711 763 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 NR1H3Q13133 447 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 DDX17Q92841 729 aaKnown RBP12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 NEUROG2Q9H2A3 272 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 SUGT1Q9Y2Z0 365 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 RASSF10A6NK89 507 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 CALR3Q96L12 384 aaKnown RBP12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 INPP5FQ9Y2H2 1132 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 DYNLT1P63172 113 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 BBS5Q8N3I7 341 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 ANKRD36BP1Q96IX9 119 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 MTRQ99707 1265 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 PRKAG2Q9UGJ0 569 aa12.44□□□□□ -0.42
SPTBN1-202ENST00000356805 PGRMC1O00264 195 aaKnown RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 GTPBP6O43824 516 aaPredicted RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 BNIP3LO60238 219 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 POLA2Q14181 598 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 KIAA1841Q6NSI8 718 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 PRPF38AQ8NAV1 312 aaKnown RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 CACTINQ8WUQ7 758 aaKnown RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 KIFC3Q9BVG8 833 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 SNX25Q9H3E2 840 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 THOC5Q13769 683 aaKnown RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 KCTD16Q68DU8 428 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 FAM186BQ8IYM0 893 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 KBTBD3Q8NAB2 608 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 BLVRAP53004 296 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 FAM95CA0A1B0GW59 222 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 H2AFZP0C0S5 128 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 NCF2P19878 526 aaPredicted RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 GALNT17Q6IS24 598 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 H2AFVQ71UI9 128 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 DEPDC1BQ8WUY9 529 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 POLR3EQ9NVU0 708 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 SERTAD1Q9UHV2 236 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 PFKFB2O60825 505 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 TOM1L1O75674 476 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 IFNAR2P48551 515 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 MYL7Q01449 175 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 FAM96AQ9H5X1 160 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 ZFXP17010 805 aaPredicted RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 PMLP29590 882 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 YWHAHQ04917 246 aaPredicted RBP12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 MESDQ14696 234 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 METTL23Q86XA0 190 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 NUDCD3Q8IVD9 361 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 CHURC1Q8WUH1 139 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 SLC12A6Q9UHW9 1150 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 PI4K2BQ8TCG2 481 aa12.43□□□□□ -0.42
SPTBN1-202ENST00000356805 PDLIM2Q96JY6 352 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms