RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 FAM237AA0A1B0GTK4 181 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 EIF4E1BA6NMX2 242 aaKnown RBP13.78□□□□□ -0.2
BDNF-202ENST00000356660 AMPD2Q01433 879 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 TCP10Q12799 353 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 FAM133BQ5BKY9 247 aaKnown RBP13.78□□□□□ -0.2
BDNF-202ENST00000356660 FMNL3Q8IVF7 1028 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 CCDC155Q8N6L0 562 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 CCDC26Q8TAB7 109 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 REXO2Q9Y3B8 237 aaKnown RBP13.78□□□□□ -0.2
BDNF-202ENST00000356660 SPATA31D1Q6ZQQ2 1576 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 FOXP2O15409 715 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 KIF4AO95239 1232 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
BDNF-202ENST00000356660 KAT2BQ92831 832 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 EPN3Q9H201 632 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.78□□□□□ -0.2
BDNF-202ENST00000356660 HAUS2Q9NVX0 235 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
BDNF-202ENST00000356660 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
BDNF-202ENST00000356660 CD2APQ9Y5K6 639 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 PEAK1Q9H792 1746 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 DDX42Q86XP3 938 aaKnown RBP eCLIP13.78□□□□□ -0.2
BDNF-202ENST00000356660 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
BDNF-202ENST00000356660 A0A1W2PQC6 194 aa13.77□□□□□ -0.2
BDNF-202ENST00000356660 GSTTP1A0A1W2PQM5 241 aa13.77□□□□□ -0.2
BDNF-202ENST00000356660 TBCAO75347 108 aaKnown RBP13.77□□□□□ -0.2
BDNF-202ENST00000356660 STK4Q13043 487 aa13.77□□□□□ -0.2
BDNF-202ENST00000356660 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.2
BDNF-202ENST00000356660 HERC4Q5GLZ8 1057 aaPredicted RBP13.77□□□□□ -0.2
BDNF-202ENST00000356660 GIGYF2Q6Y7W6 1299 aaKnown RBP13.77□□□□□ -0.2
BDNF-202ENST00000356660 TBC1D1Q86TI0 1168 aaPredicted RBP13.77□□□□□ -0.2
BDNF-202ENST00000356660 NLRP10Q86W26 655 aa13.77□□□□□ -0.2
BDNF-202ENST00000356660 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.2
BDNF-202ENST00000356660 ATP6V1G3Q96LB4 118 aa13.77□□□□□ -0.2
BDNF-202ENST00000356660 ZBTB21Q9ULJ3 1066 aa13.77□□□□□ -0.2
BDNF-202ENST00000356660 TSPOAP1O95153 1857 aa13.77□□□□□ -0.2
BDNF-202ENST00000356660 WNT7AO00755 349 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 SP4Q02446 784 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 DHX9Q08211 1270 aaKnown RBP13.77□□□□□ -0.21
BDNF-202ENST00000356660 ELOA2Q8IYF1 753 aaPredicted RBP13.77□□□□□ -0.21
BDNF-202ENST00000356660 GOLPH3Q9H4A6 298 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 IRAK4Q9NWZ3 460 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 MROH5Q6ZUA9 1318 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 LMTK3Q96Q04 1460 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 OR52Z1P0C646 297 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 SRGNP10124 158 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 ABCB4P21439 1286 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 MDH1P40925 334 aaKnown RBP13.77□□□□□ -0.21
BDNF-202ENST00000356660 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
BDNF-202ENST00000356660 TNIP1Q15025 636 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 NONOQ15233 471 aaKnown RBP eCLIP13.77□□□□□ -0.21
BDNF-202ENST00000356660 LLGL1Q15334 1064 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 VWA3BQ502W6 1294 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 TMTC3Q6ZXV5 915 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 CCDC50Q8IVM0 306 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 PHF20Q9BVI0 1012 aa13.77□□□□□ -0.21
BDNF-202ENST00000356660 GMNCA6NCL1 334 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 HMGB1P1B2RPK0 211 aaPredicted RBP13.76□□□□□ -0.21
BDNF-202ENST00000356660 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
BDNF-202ENST00000356660 TRAPPC10P48553 1259 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 SUGP1Q8IWZ8 645 aaKnown RBP13.76□□□□□ -0.21
BDNF-202ENST00000356660 SRBD1Q8N5C6 995 aaKnown RBP13.76□□□□□ -0.21
BDNF-202ENST00000356660 ANKRD2Q9GZV1 360 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 DDX47Q9H0S4 455 aaKnown RBP13.76□□□□□ -0.21
BDNF-202ENST00000356660 GNA11P29992 359 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 SLCO1A2P46721 670 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 MAGOHP61326 146 aaKnown RBP13.76□□□□□ -0.21
BDNF-202ENST00000356660 UBE4AQ14139 1066 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 MAN2A1Q16706 1144 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 MAGOHBQ96A72 148 aaKnown RBP13.76□□□□□ -0.21
BDNF-202ENST00000356660 ANKRD62A6NC57 917 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 NSRP1Q9H0G5 558 aaKnown RBP13.76□□□□□ -0.21
BDNF-202ENST00000356660 SH2D4AQ9H788 454 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
BDNF-202ENST00000356660 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 SMCO2A6NFE2 343 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 FAM153BP0C7A2 387 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 ELF1P32519 619 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 SIK1P57059 783 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 CHRNDQ07001 517 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 FAM153CQ494X1 144 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 FAM153AQ9UHL3 310 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 AGLP35573 1532 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 PHF20L1A8MW92 1017 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 GLI1P08151 1106 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 ALX1Q15699 326 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 CCDC13Q8IYE1 715 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 OGFOD1Q8N543 542 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 PIGBQ92521 554 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 DNAJC7Q99615 494 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.75□□□□□ -0.21
BDNF-202ENST00000356660 SCP2P22307 547 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 PPP1R2P41236 205 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 PARP9Q8IXQ6 854 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 MMGT1Q8N4V1 131 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms