RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 EXOC1Q9NV70 894 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 KCND2Q9NZV8 630 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 FAM196BA6NMK8 535 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 GCOM1H8Y6P7 765 aaPredicted RBP12.04□□□□□ -0.48
EPB41-203ENST00000349460 ARHGAP6O43182 974 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 POLR2MP0CAP2 368 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
EPB41-203ENST00000349460 TXKP42681 527 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 PPP2R5CQ13362 524 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 FIGNQ5HY92 759 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 GPC2Q8N158 579 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
EPB41-203ENST00000349460 CDK5RAP3Q96JB5 506 aa12.04□□□□□ -0.48
EPB41-203ENST00000349460 IGLV3-22A0A075B6J6 115 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 ATP2A1O14983 1001 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 SYCP1Q15431 976 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 SLC5A5Q92911 643 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 P2RX5Q93086 422 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 WDR90Q96KV7 1748 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 ZBTB7AO95365 584 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 B3GNT9Q6UX72 402 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 CCAR2Q8N163 923 aaKnown RBP12.03□□□□□ -0.48
EPB41-203ENST00000349460 ACER1Q8TDN7 264 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 TMEM174Q8WUU8 243 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 BMP2KQ9NSY1 1161 aaPredicted RBP12.03□□□□□ -0.48
EPB41-203ENST00000349460 PP2D1A8MPX8 630 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 C19orf81C9J6K1 198 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 GMPSP49915 693 aaPredicted RBP12.03□□□□□ -0.48
EPB41-203ENST00000349460 SHROOM1Q2M3G4 852 aaPredicted RBP12.03□□□□□ -0.48
EPB41-203ENST00000349460 TKFCQ3LXA3 575 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 RASSF8Q8NHQ8 419 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 ZNF830Q96NB3 372 aaPredicted RBP12.03□□□□□ -0.48
EPB41-203ENST00000349460 VEZTQ9HBM0 779 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 SAMSN1Q9NSI8 373 aaKnown RBP12.03□□□□□ -0.48
EPB41-203ENST00000349460 VAV3Q9UKW4 847 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 ADAMTS5Q9UNA0 930 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 CTNND2Q9UQB3 1225 aa12.03□□□□□ -0.48
EPB41-203ENST00000349460 ECE1P42892 770 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 MARSP56192 900 aaKnown RBP12.02□□□□□ -0.49
EPB41-203ENST00000349460 KIAA1755Q5JYT7 1200 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 FAM83BQ5T0W9 1011 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 ISM2Q6H9L7 571 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 TMEM139Q8IV31 216 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 CNGA4Q8IV77 575 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 DNAJC19Q96DA6 116 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 RIT2Q99578 217 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 SLF1Q9BQI6 1058 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 NUP58Q9BVL2 599 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 BLZF1Q9H2G9 400 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 CNOT7Q9UIV1 285 aaKnown RBP12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 COPB1P53618 953 aaKnown RBP12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 NFIL3Q16649 462 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 KIF4BQ2VIQ3 1234 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 USP17L6PQ6QN14 398 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 SCYL3Q8IZE3 742 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 SLC38A10Q9HBR0 1119 aa12.02□□□□□ -0.49
EPB41-203ENST00000349460 UBE4BO95155 1302 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 MYMKA6NI61 221 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 LGALS16A8MUM7 142 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 LRMPQ12912 555 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 IRF2BP1Q8IU81 584 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 MYRIPQ8NFW9 859 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 ZNF507Q8TCN5 953 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 EDEM3Q9BZQ6 932 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 ZNF536O15090 1300 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 KCNJ18B7U540 433 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 MEIS1O00470 390 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 GNA14O95837 355 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 LMNB1P20700 586 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 DNM2P50570 870 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 PDE4DQ08499 809 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 KCNJ12Q14500 433 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 KRT31Q15323 416 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 BMT2Q1RMZ1 405 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 SH3D19Q5HYK7 790 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 FILIP1Q7Z7B0 1213 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 SYT2Q8N9I0 419 aaPredicted RBP12.01□□□□□ -0.49
EPB41-203ENST00000349460 TC2NQ8N9U0 490 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 CEP63Q96MT8 703 aa12.01□□□□□ -0.49
EPB41-203ENST00000349460 P2RX7Q99572 595 aaKnown RBP12.01□□□□□ -0.49
EPB41-203ENST00000349460 ZC3H4Q9UPT8 1303 aaKnown RBP12.01□□□□□ -0.49
EPB41-203ENST00000349460 A0A1W2PQJ5 194 aa12□□□□□ -0.49
EPB41-203ENST00000349460 ZSCAN12O43309 604 aa12□□□□□ -0.49
EPB41-203ENST00000349460 SLC12A3P55017 1021 aa12□□□□□ -0.49
EPB41-203ENST00000349460 ASIC1P78348 528 aa12□□□□□ -0.49
EPB41-203ENST00000349460 TPD52L1Q16890 204 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms