RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PCDHA2Q9Y5H9 948 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 CTAGE9A4FU28 777 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 PHACTR2O75167 634 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 HNRNPH2P55795 449 aaKnown RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 C2orf54Q08AI8 447 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 KCNA1Q09470 495 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 TRADDQ15628 312 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 DPY19L2P1Q6NXN4 242 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 REXO1Q8N1G1 1221 aaKnown RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 PROCA1Q8NCQ7 364 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 BAP1Q92560 729 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 RRP36Q96EU6 259 aaKnown RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 DRC1Q96MC2 740 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 DBNDD1Q9H9R9 158 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 EXOC1Q9NV70 894 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 LCMT1Q9UIC8 334 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 AJAP1Q9UKB5 411 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 LUC7L2Q9Y383 392 aaKnown RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 OPLAHO14841 1288 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 NRDCO43847 1150 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 TUBB4AP04350 444 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 TNNI2P48788 182 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 GFPT1Q06210 699 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 CCDC122Q5T0U0 273 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 MEX3CQ5U5Q3 659 aaKnown RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 HGSNATQ68CP4 663 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 CDAN1Q8IWY9 1227 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 NAPGQ99747 312 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 NOC4LQ9BVI4 516 aaKnown RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 SCAF8Q9UPN6 1271 aaKnown RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 A0A1W2PQC6 194 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 LRRC53A6NM62 1247 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 PSMD14O00487 310 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 MED24O75448 989 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 MOCS3O95396 460 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 SYF2O95926 243 aaKnown RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 ZNF543Q08ER8 600 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 CALCRLQ16602 461 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 GRIPAP1Q4V328 841 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 TBC1D5Q92609 795 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 MS4A14Q96JA4 679 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 PURBQ96QR8 312 aaKnown RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 CRACR2AQ9BSW2 395 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 USP40Q9NVE5 1235 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 ZNF219Q9P2Y4 722 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 TTF2Q9UNY4 1162 aaKnown RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 QSER1Q2KHR3 1735 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 POTEB3A0JP26 581 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 KLRG2A4D1S0 409 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 GOLGA6L9A6NEM1 432 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 POTECB2RU33 542 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 MEIS1O00470 390 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 EEF1GP26641 437 aaKnown RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 ASTE1Q2TB18 679 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 ZCWPW2Q504Y3 356 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 POTEBQ6S5H4 581 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 CREG2Q8IUH2 290 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 NELFCDQ8IXH7 590 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 MTMR8Q96EF0 704 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 PACSIN1Q9BY11 444 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 GOLPH3Q9H4A6 298 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 RMND1Q9NWS8 449 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 ADAM21Q9UKJ8 722 aa6.74□□□□□ -1.33
CLCN3-201ENST00000347613 ATF5Q9Y2D1 282 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-201ENST00000347613 ZSCAN5CA6NGD5 496 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 RBAK-RBAKDNI3L0D1 243 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 AGPSO00116 658 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 MEIS2O14770 477 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 TRIM21P19474 475 aaKnown RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 EIF4A3P38919 411 aaKnown RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 SLC7A5Q01650 507 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 PTPROQ16827 1216 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 TMEM119Q4V9L6 283 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 MSL1Q68DK7 614 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 NFRKBQ6P4R8 1299 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 C2CD5Q86YS7 1000 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 LARP4BQ92615 738 aaKnown RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 RAD54LQ92698 747 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 CCDC51Q96ER9 411 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 DHTKD1Q96HY7 919 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 C6orf50Q9HD87 102 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 ARFGAP3Q9NP61 516 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 FAM198AQ9UFP1 575 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 DMGDHQ9UI17 866 aaKnown RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 RSPH10B2B2RC85 870 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 PSMA7O14818 248 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 RAD21O60216 631 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 KIF20AO95235 890 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 RSPH10BP0C881 870 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 ACTN1P12814 892 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 IDEP14735 1019 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 ATP2B4P23634 1241 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 MTIF2P46199 727 aaKnown RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 FXR2P51116 673 aaKnown RBP eCLIP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 GSTO1P78417 241 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 SPIRE1Q08AE8 756 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 VWA3BQ502W6 1294 aa6.73□□□□□ -1.33
CLCN3-201ENST00000347613 PAPD7Q5XG87 772 aaKnown RBP6.73□□□□□ -1.33
CLCN3-201ENST00000347613 CC2D2BQ6DHV5 1058 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms