RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 AMNQ9BXJ7 453 aa14.42□□□□□ -0.1
SGCA-202ENST00000344627 PRDM12Q9H4Q4 367 aa14.42□□□□□ -0.1
SGCA-202ENST00000344627 CXXC1Q9P0U4 656 aaPredicted RBP14.42□□□□□ -0.1
SGCA-202ENST00000344627 MAD2L2Q9UI95 211 aa14.42□□□□□ -0.1
SGCA-202ENST00000344627 NOD1Q9Y239 953 aa14.42□□□□□ -0.1
SGCA-202ENST00000344627 RBM8AQ9Y5S9 174 aaKnown RBP14.42□□□□□ -0.1
SGCA-202ENST00000344627 TAF6LQ9Y6J9 622 aa14.42□□□□□ -0.1
SGCA-202ENST00000344627 VCANP13611 3396 aa14.42□□□□□ -0.1
SGCA-202ENST00000344627 EYSQ5T1H1 3165 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 ZBBXA8MT70 800 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 GRXCR1A8MXD5 290 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 EFCAB14O75071 495 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 GH1P01241 217 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 EIF2AK2P19525 551 aaKnown RBP14.41□□□□□ -0.1
SGCA-202ENST00000344627 NBPF20Q3BBV1 942 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 CASC1Q6TDU7 716 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 CATIPQ7Z7H3 387 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 PIBF1Q8WXW3 757 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 EMID1Q96A84 441 aaPredicted RBP14.41□□□□□ -0.1
SGCA-202ENST00000344627 ASB2Q96Q27 587 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 UMODL1Q5DID0 1318 aa14.41□□□□□ -0.1
SGCA-202ENST00000344627 PALM3A6NDB9 673 aaPredicted RBP14.4□□□□□ -0.1
SGCA-202ENST00000344627 GTPBP6O43824 516 aaPredicted RBP14.4□□□□□ -0.1
SGCA-202ENST00000344627 EIF3JO75822 258 aaKnown RBP14.4□□□□□ -0.1
SGCA-202ENST00000344627 IQCF3P0C7M6 154 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 GHRHRQ02643 423 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 RBL2Q08999 1139 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 GRM4Q14833 912 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 CCDC62Q6P9F0 684 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 STOX1Q6ZVD7 989 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 MAP4K1Q92918 833 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 NKX2-4Q9H2Z4 354 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 SENP2Q9HC62 589 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 TRMT13Q9NUP7 481 aaKnown RBP14.4□□□□□ -0.1
SGCA-202ENST00000344627 COL20A1Q9P218 1284 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 PCDHA1Q9Y5I3 950 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 MYH7BA7E2Y1 1941 aa14.4□□□□□ -0.1
SGCA-202ENST00000344627 KIAA1217Q5T5P2 1943 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 MYO9BQ13459 2157 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 ZBTB5O15062 677 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 MYCLP12524 364 aaPredicted RBP14.39□□□□□ -0.11
SGCA-202ENST00000344627 IGFBP4P22692 258 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 LAMC2Q13753 1193 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 DGKDQ16760 1214 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 LY6KQ17RY6 165 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 NFXL1Q6ZNB6 911 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 USP38Q8NB14 1042 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 PPP1R13LQ8WUF5 828 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 SCLYQ96I15 445 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 PIGSQ96S52 555 aa14.39□□□□□ -0.11
SGCA-202ENST00000344627 SPTBN5Q9NRC6 3674 aaKnown RBP14.39□□□□□ -0.11
SGCA-202ENST00000344627 ARIH2O95376 493 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 TGFB3P10600 412 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 CYP2C9P11712 490 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 HOXA13P31271 388 aaPredicted RBP14.38□□□□□ -0.11
SGCA-202ENST00000344627 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 AFG1LQ8WV93 481 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 ESYT1Q9BSJ8 1104 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 ANO2Q9NQ90 1003 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 PXMP2Q9NR77 195 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 LMCD1Q9NZU5 365 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 COG5Q9UP83 839 aa14.38□□□□□ -0.11
SGCA-202ENST00000344627 YBX2Q9Y2T7 364 aaKnown RBP14.38□□□□□ -0.11
SGCA-202ENST00000344627 GCOM1H8Y6P7 765 aaPredicted RBP14.37□□□□□ -0.11
SGCA-202ENST00000344627 PRC1O43663 620 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
SGCA-202ENST00000344627 NR3C2P08235 984 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 MMP3P08254 477 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 POLR2MP0CAP2 368 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 KCNJ6P48051 423 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 ADGRE1Q14246 886 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 PTGISQ16647 500 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
SGCA-202ENST00000344627 FCHSD1Q86WN1 690 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 MB21D2Q8IYB1 491 aaPredicted RBP14.37□□□□□ -0.11
SGCA-202ENST00000344627 PPTC7Q8NI37 304 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 CTCFLQ8NI51 663 aaPredicted RBP14.37□□□□□ -0.11
SGCA-202ENST00000344627 MTMR8Q96EF0 704 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 MYL10Q9BUA6 226 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 FTOQ9C0B1 505 aaKnown RBP eCLIP14.37□□□□□ -0.11
SGCA-202ENST00000344627 MRVI1Q9Y6F6 885 aa14.37□□□□□ -0.11
SGCA-202ENST00000344627 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 ABHD14A-ACY1A0A1B0GW23 586 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 CCDC69A6NI79 296 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 PPFIA4O75335 1185 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 SELPP16109 830 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 MCM5P33992 734 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 HSD17B4P51659 736 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 ANTXR2P58335 489 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 ARHGAP1Q07960 439 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 TROAPQ12815 778 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 DEFB128Q7Z7B8 93 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 ZNF654Q8IZM8 581 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 C7orf31Q8N865 590 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 IGDCC4Q8TDY8 1250 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 VWCEQ96DN2 955 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 LSG1Q9H089 658 aaKnown RBP14.36□□□□□ -0.11
SGCA-202ENST00000344627 RIOX1Q9H6W3 641 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms