RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PMS2P54278 862 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 OLFML1Q6UWY5 402 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 WDR60Q8WVS4 1066 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TMA7Q9Y2S6 64 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 H3BNX3 289 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ZSCAN25Q6NSZ9 544 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 LARP1Q6PKG0 1096 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 BICDL1Q6ZP65 573 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 NLRP4Q96MN2 994 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PACSIN2Q9UNF0 486 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 UHRF1BP1Q6BDS2 1440 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CALUO43852 315 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PDE5AO76074 875 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PPP2R1AP30153 589 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 RUNX1T1Q06455 604 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ALLCQ8N6M5 410 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 SPATA18Q8TC71 538 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CNPY3Q9BT09 278 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CDC23Q9UJX2 597 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ABCC12Q96J65 1359 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PDE9AO76083 593 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 PRPF6O94906 941 aaKnown RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 ATP2B2Q01814 1243 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 MMADHCQ9H3L0 296 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-202ENST00000344113 CARMIL2Q6F5E8 1435 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 GOLGA8IPA6NC78 632 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 LRRC8EQ6NSJ5 796 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TMTC1Q8IUR5 882 aa4.08□□□□□ -1.76
SYNE2-202ENST00000344113 TLR3O15455 904 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ACTN3Q08043 901 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SRRM1Q8IYB3 904 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 RBM46Q8TBY0 533 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 DQX1Q8TE96 717 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CPLX3Q8WVH0 158 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 TYW1Q9NV66 732 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 LIMA1Q9UHB6 759 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 FAM135BQ49AJ0 1406 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ASXL2Q76L83 1435 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 TTC21AQ8NDW8 1320 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC78A2IDD5 438 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 DCTN3O75935 186 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SERPINB2P05120 415 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 HSPA1LP34931 641 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 NT5C2P49902 561 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 DRICH1Q6PGQ1 229 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 C20orf96Q9NUD7 363 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 BLMP54132 1417 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 IL1RL1Q01638 556 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 GRIN1Q05586 938 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF268Q14587 947 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CAVIN4Q5BKX8 364 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 C1QTNF12Q5T7M4 302 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 IRGCQ6NXR0 463 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ARHGAP42A6NI28 874 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SYN1P17600 705 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 RTL3Q8N8U3 475 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 FAXDC2Q96IV6 333 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ZFRQ96KR1 1074 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 EPN3Q9H201 632 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 MAGEE1Q9HCI5 957 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SNIP1Q8TAD8 396 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 COG1Q8WTW3 980 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 POP5Q969H6 163 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 UBE2OQ9C0C9 1292 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 BTBD7Q9P203 1132 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ORC3Q9UBD5 711 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 R3HDM2Q9Y2K5 976 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SAMD9Q5K651 1589 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ECDO95905 644 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ATXN3P54252 364 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 C20orf194Q5TEA3 1177 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF658Q5TYW1 1059 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 RWDD4Q6NW29 188 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 PARD3BQ8TEW8 1205 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CDCA7LQ96GN5 454 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ZC3H4Q9UPT8 1303 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC141Q6ZP82 1450 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 MAGEB16A2A368 324 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ELF2Q15723 593 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 KRT73Q86Y46 540 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 RAB17Q9H0T7 212 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 IRF2BPLQ9H1B7 796 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 LCMT1Q9UIC8 334 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 DDX17Q92841 729 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CLMNQ96JQ2 1002 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SNX27Q96L92 541 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 C6orf62Q9GZU0 229 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ZBTB8BQ8NAP8 495 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 NELFBQ8WX92 580 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 B3GALT6Q96L58 329 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 C8orf4Q9NR00 106 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 HSP90AA4PQ58FG1 418 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 AIPL1Q9NZN9 384 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 ARMC3Q5W041 872 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 CYP26C1Q6V0L0 522 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 SCFD1Q8WVM8 642 aa4.07□□□□□ -1.76
SYNE2-202ENST00000344113 UBA2Q9UBT2 640 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 BZW2Q9Y6E2 419 aaKnown RBP4.07□□□□□ -1.76
SYNE2-202ENST00000344113 PTPN2P17706 415 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms