RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 TRAF5O00463 557 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 SMAD7O15105 426 aaKnown RBP7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 PLIN1O60240 522 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 NCLP19338 710 aaKnown RBP7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 AFF1P51825 1210 aaKnown RBP7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 IFIT5Q13325 482 aaKnown RBP7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 TNIP1Q15025 636 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 GRIK5Q16478 980 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 RABL6Q3YEC7 729 aaPredicted RBP7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 USP50Q70EL3 339 aaPredicted RBP7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 PNMA8AQ86V59 439 aaPredicted RBP7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 KLHDC4Q8TBB5 520 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 SRPK1Q96SB4 655 aaKnown RBP7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 MPHOSPH8Q99549 860 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 PGAP2Q9UHJ9 254 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 LEMD3Q9Y2U8 911 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 RIPOR2Q9Y4F9 1068 aa7.62□□□□□ -1.19
RNFT1P3-201ENST00000340898 A0A1B0GUL6 1792 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 ZNF804BA4D1E1 1349 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 CT47B1P0C2W7 299 aaPredicted RBP7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 RFX5P48382 616 aaPredicted RBP7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 CLCQ05315 142 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 PTPN11Q06124 597 aaPredicted RBP7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 POU4F3Q15319 338 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 TBC1D10BQ4KMP7 808 aaPredicted RBP7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 LRRC24Q50LG9 513 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 CST9Q5W186 159 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 ZNF385CQ66K41 422 aaPredicted RBP7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 SDE2Q6IQ49 451 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 LDHAL6AQ6ZMR3 332 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 WHAMMQ8TF30 809 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 DPF2Q92785 391 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 GLIS2Q9BZE0 524 aaPredicted RBP7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 EHMT1Q9H9B1 1298 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 KRT82Q9NSB4 513 aa7.61□□□□□ -1.19
RNFT1P3-201ENST00000340898 MED23Q9ULK4 1368 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 PSME4Q14997 1843 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 FSCN2O14926 492 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 WIPF1O43516 503 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 CCDC57Q2TAC2 916 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 DACT2Q5SW24 774 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 PODNQ7Z5L7 613 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 RBBP8NLQ8NC74 664 aaPredicted RBP7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 MEIS3Q99687 375 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 ANKRD2Q9GZV1 360 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 CD209Q9NNX6 404 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 CACNA2D2Q9NY47 1150 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 ACTR10Q9NZ32 417 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 PCDHA4Q9UN74 947 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 SCAF8Q9UPN6 1271 aaKnown RBP7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 PCDHB14Q9Y5E9 798 aa7.6□□□□□ -1.19
RNFT1P3-201ENST00000340898 H7C1D1 291 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 ATE1O95260 518 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 TRIM27P14373 513 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 MAOBP27338 520 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 ZNF280AP59817 542 aaPredicted RBP7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 LRRFIP1Q32MZ4 808 aaKnown RBP7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 HP1BP3Q5SSJ5 553 aaPredicted RBP7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 HGSNATQ68CP4 663 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 TTLL5Q6EMB2 1281 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 TXNDC11Q6PKC3 985 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 C8orf86Q6ZUL3 223 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 C15orf52Q6ZUT6 534 aaKnown RBP7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 CERS5Q8N5B7 392 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 JMYQ8N9B5 988 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 KLHL23Q8NBE8 558 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 GPBAR1Q8TDU6 330 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 COA1Q9GZY4 146 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 CNNM1Q9NRU3 951 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 JAG2Q9Y219 1238 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 PCDHAC2Q9Y5I4 1007 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 SNCAIPQ9Y6H5 919 aa7.59□□□□□ -1.19
RNFT1P3-201ENST00000340898 ANKRD62A6NC57 917 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 SPDYE3A6NKU9 549 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 CLSTN1O94985 981 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 RPS12P25398 132 aaKnown RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 GYG1P46976 350 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 NBPF9Q3BBW0 867 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 TAF7LQ5H9L4 462 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 INTS3Q68E01 1043 aaKnown RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 HDXQ7Z353 690 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 ATG9AQ7Z3C6 839 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 MAP4K3Q8IVH8 894 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 FAM169BQ8N8A8 192 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 VGLL2Q8N8G2 317 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 AGBL3Q8NEM8 1001 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 ARHGAP45Q92619 1136 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 FRAT1Q92837 279 aaPredicted RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 FAM84BQ96KN1 310 aaPredicted RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 DEPDC7Q96QD5 511 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 API5Q9BZZ5 524 aaKnown RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 PA2G4Q9UQ80 394 aaKnown RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 POLR3KQ9Y2Y1 108 aaPredicted RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 LRRFIP2Q9Y608 721 aaKnown RBP7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 TRPM7Q96QT4 1865 aa7.58□□□□□ -1.2
RNFT1P3-201ENST00000340898 AOX1Q06278 1338 aa7.57□□□□□ -1.2
RNFT1P3-201ENST00000340898 ADM5C9JUS6 153 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms