RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ZBTB5O15062 677 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 TADA3O75528 432 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 NLRP12P59046 1061 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 ATL3Q6DD88 541 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 DCPSQ96C86 337 aaKnown RBP16.87■□□□□ 0.29
BRAT1-201ENST00000340611 VCPKMTQ9H867 229 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 POTECB2RU33 542 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 YEATS4O95619 227 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 SERPINC1P01008 464 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 SYDE2Q5VT97 1194 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 KAT2BQ92831 832 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 CEP89Q96ST8 783 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 FAN1Q9Y2M0 1017 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 PCDHA1Q9Y5I3 950 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 ZHX2Q9Y6X8 837 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 M0R2N6 131 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 RILPL1Q5EBL4 403 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 TADA2BQ86TJ2 420 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 SULF1Q8IWU6 871 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 FUT8Q9BYC5 575 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 ZMYND12Q9H0C1 365 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 CCDC194A0A1B0GVG4 234 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 A0A1W2PQ27 194 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 A0A1W2PQ64 194 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 A0A1W2PQD8 194 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 UBASH3AP57075 661 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 TTC38Q5R3I4 469 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 SHC4Q6S5L8 630 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
BRAT1-201ENST00000340611 JPH2Q9BR39 696 aaPredicted RBP16.86■□□□□ 0.29
BRAT1-201ENST00000340611 GOPCQ9HD26 462 aa16.86■□□□□ 0.29
BRAT1-201ENST00000340611 PHLPP2Q6ZVD8 1323 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 GLTPD2A6NH11 291 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 CTNND1O60716 968 aaKnown RBP16.85■□□□□ 0.29
BRAT1-201ENST00000340611 PFKFB1P16118 471 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 HSD3B7Q9H2F3 369 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 NEBLO76041 1014 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 CALML3P27482 149 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 CDC25AP30304 524 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 STAT2P52630 851 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 CCDC148Q8NFR7 591 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 KLRG1Q96E93 195 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 BPIFA3Q9BQP9 254 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 PARD6BQ9BYG5 372 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 SH3GLB2Q9NR46 395 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 PSD3Q9NYI0 1048 aa16.85■□□□□ 0.29
BRAT1-201ENST00000340611 USP2O75604 605 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-201ENST00000340611 PTGDRQ13258 359 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 LRRC31Q6UY01 552 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 TBC1D5Q92609 795 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 RABEP2Q9H5N1 569 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 CLEC11AQ9Y240 323 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 HMGCS2P54868 508 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 LETM2Q2VYF4 491 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 DCAF15Q66K64 600 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 PDILTQ8N807 584 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 WNK4Q96J92 1243 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 P2RX7Q99572 595 aaKnown RBP16.84■□□□□ 0.29
BRAT1-201ENST00000340611 ZNF408Q9H9D4 720 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 C6orf50Q9HD87 102 aa16.84■□□□□ 0.29
BRAT1-201ENST00000340611 PEX10O60683 326 aa16.83■□□□□ 0.29
BRAT1-201ENST00000340611 PTPRAP18433 802 aa16.83■□□□□ 0.29
BRAT1-201ENST00000340611 HOXA13P31271 388 aaPredicted RBP16.83■□□□□ 0.29
BRAT1-201ENST00000340611 KCNJ6P48051 423 aa16.83■□□□□ 0.29
BRAT1-201ENST00000340611 LONRF2Q1L5Z9 754 aa16.83■□□□□ 0.29
BRAT1-201ENST00000340611 MAP1SQ66K74 1059 aaPredicted RBP16.83■□□□□ 0.29
BRAT1-201ENST00000340611 NAIF1Q69YI7 327 aaPredicted RBP16.83■□□□□ 0.29
BRAT1-201ENST00000340611 GJA10Q969M2 543 aa16.83■□□□□ 0.29
BRAT1-201ENST00000340611 MTMR8Q96EF0 704 aa16.83■□□□□ 0.29
BRAT1-201ENST00000340611 CLMNQ96JQ2 1002 aa16.83■□□□□ 0.29
BRAT1-201ENST00000340611 TANGO6Q9C0B7 1094 aa16.83■□□□□ 0.29
BRAT1-201ENST00000340611 TRAF5O00463 557 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 HNRNPH1P31943 449 aaKnown RBP16.83■□□□□ 0.28
BRAT1-201ENST00000340611 ADCY7P51828 1080 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 SCYL3Q8IZE3 742 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 REXO1Q8N1G1 1221 aaKnown RBP16.83■□□□□ 0.28
BRAT1-201ENST00000340611 CEP120Q8N960 986 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 WDR24Q96S15 920 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 TMEM60Q9H2L4 133 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.83■□□□□ 0.28
BRAT1-201ENST00000340611 EMILIN3Q9NT22 766 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 FBXO2Q9UK22 296 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-201ENST00000340611 SH3BP1Q9Y3L3 701 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 ERLIN2O94905 339 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 TPM1P09493 284 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 TTLL12Q14166 644 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-201ENST00000340611 CPXCR1Q8N123 301 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 GIMAP7Q8NHV1 300 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 TBCKQ8TEA7 893 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 TAF1DQ9H5J8 278 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-201ENST00000340611 SUGCTQ9HAC7 445 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 PICK1Q9NRD5 415 aa16.83■□□□□ 0.28
BRAT1-201ENST00000340611 VWA3AA6NCI4 1184 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 GNG11P61952 73 aa16.82■□□□□ 0.28
BRAT1-201ENST00000340611 IL17AQ16552 155 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms