RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 PLA2G5P39877 138 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 GPATCH4Q5T3I0 446 aaKnown RBP16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 FAM117BQ6P1L5 589 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 LRRC8DQ7L1W4 858 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 ADGRF4Q8IZF3 695 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 CCDC155Q8N6L0 562 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 RGS22Q8NE09 1264 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 AFAP1L1Q8TED9 768 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 HLA-CQ95604 372 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 VAT1LQ9HCJ6 419 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 COG5Q9UP83 839 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 ZMYM6O95789 1325 aa16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 COL4A4P53420 1690 aaPredicted RBP16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 DHX16O60231 1041 aaKnown RBP16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 NBNO60934 754 aa16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 ZNF286BP0CG31 522 aa16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 CAGE1Q8TC20 777 aa16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 ESR2Q92731 530 aa16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 KHSRPQ92945 711 aaKnown RBP eCLIP16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 FAM122AQ96E09 287 aa16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 C1QTNF1Q9BXJ1 281 aa16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 LNPKQ9C0E8 428 aa16.13■□□□□ 0.17
UPK3BL1-201ENST00000340457 MYH6P13533 1939 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 KIAA1217Q5T5P2 1943 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 ABCB11O95342 1321 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 MYH7BA7E2Y1 1941 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 KDM4AO75164 1064 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 CKBP12277 381 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 CASTP20810 708 aaKnown RBP16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 PSEN2P49810 448 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 ZNF200P98182 395 aaPredicted RBP16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 STXBP2Q15833 593 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 QRICH1Q2TAL8 776 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 C7orf31Q8N865 590 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 WNT8BQ93098 351 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 KAT14Q9H8E8 782 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 GTF2IRD1Q9UHL9 959 aa16.12■□□□□ 0.17
UPK3BL1-201ENST00000340457 B4E1Z4 1266 aa16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 ZNF213O14771 459 aa16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 PCP11498 1178 aaKnown RBP16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 DGKDQ16760 1214 aa16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 ARHGEF16Q5VV41 709 aa16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 CNKSR3Q6P9H4 555 aa16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 SESTD1Q86VW0 696 aa16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 DGKHQ86XP1 1220 aa16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 LRFN3Q9BTN0 628 aa16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 DDX41Q9UJV9 622 aaKnown RBP16.11■□□□□ 0.17
UPK3BL1-201ENST00000340457 CFBP00751 764 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 SDSP20132 328 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 MFSD10Q14728 455 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 KIAA0753Q2KHM9 967 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 ZNF618Q5T7W0 954 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 FBXO11Q86XK2 927 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 MCF2L2Q86YR7 1114 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 IWS1Q96ST2 819 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 JMJD4Q9H9V9 463 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 SUGCTQ9HAC7 445 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 MRVI1Q9Y6F6 885 aa16.1■□□□□ 0.17
UPK3BL1-201ENST00000340457 FAM86C2PA6NEL3 165 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 GJB5O95377 273 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 CXCL10P02778 98 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 NR3C2P08235 984 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 MYCLP12524 364 aaPredicted RBP16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 HIC1Q14526 733 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 MBTPS1Q14703 1052 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 TRIM71Q2Q1W2 868 aaKnown RBP16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 ERICH6BQ5W0A0 696 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 TRAF7Q6Q0C0 670 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 CWC27Q6UX04 472 aaKnown RBP16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 IQCA1Q86XH1 822 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 DHX37Q8IY37 1157 aaKnown RBP16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 ENAHQ8N8S7 591 aaPredicted RBP16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 ZSCAN10Q96SZ4 725 aaPredicted RBP16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 RAD9AQ99638 391 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 CD320Q9NPF0 282 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 PXMP2Q9NR77 195 aa16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 MRPL11Q9Y3B7 192 aaKnown RBP16.09■□□□□ 0.17
UPK3BL1-201ENST00000340457 LINC01553A4QN01 128 aa16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 OPLAHO14841 1288 aa16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 RBL2Q08999 1139 aa16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 HDAC1Q13547 482 aaPredicted RBP16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 IKBKEQ14164 716 aa16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 TGS1Q96RS0 853 aaKnown RBP16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
UPK3BL1-201ENST00000340457 MYO7AQ13402 2215 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms