RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 SNAP25P60880 206 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 POLR3CQ9BUI4 534 aaPredicted RBP12.78□□□□□ -0.36
SHANK2-201ENST00000338508 DAB2P98082 770 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 SMAD1Q15797 465 aaKnown RBP12.77□□□□□ -0.36
SHANK2-201ENST00000338508 ANKRD20A4Q4UJ75 823 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 GLE1Q53GS7 698 aaKnown RBP12.77□□□□□ -0.36
SHANK2-201ENST00000338508 ANKRD20A8PQ5CZ79 823 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 ANKRD20A2Q5SQ80 823 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 ANKRD20A1Q5TYW2 823 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 MIGA2Q7L4E1 593 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 TRIM4Q9C037 500 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 IMPACTQ9P2X3 320 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 KCNG1Q9UIX4 513 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 TLK1Q9UKI8 766 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 MYL3P08590 195 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 TMED1Q13445 227 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 ZC3H12BQ5HYM0 836 aaKnown RBP12.77□□□□□ -0.36
SHANK2-201ENST00000338508 RNF219Q5W0B1 726 aaPredicted RBP12.77□□□□□ -0.36
SHANK2-201ENST00000338508 ADALQ6DHV7 355 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 FRA10AC1Q70Z53 315 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 RETREG2Q8NC44 543 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 PNMA1Q8ND90 353 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 SARS2Q9NP81 518 aaKnown RBP12.77□□□□□ -0.36
SHANK2-201ENST00000338508 KMT5AQ9NQR1 393 aa12.77□□□□□ -0.36
SHANK2-201ENST00000338508 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.36
SHANK2-201ENST00000338508 ZNF608Q9ULD9 1512 aaPredicted RBP12.77□□□□□ -0.36
SHANK2-201ENST00000338508 HADHAP40939 763 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 OCRLQ01968 901 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 EEF1DP29692 281 aaKnown RBP12.77□□□□□ -0.37
SHANK2-201ENST00000338508 SLC16A2P36021 539 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 CTSWP56202 376 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 GCKRQ14397 625 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 EXOC3L4Q17RC7 722 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 PCGF5Q86SE9 256 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 MAP7D3Q8IWC1 876 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 YIPF2Q9BWQ6 316 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 ASXL1Q8IXJ9 1541 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 ENC1O14682 589 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 GDF11O95390 407 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 NCLNQ969V3 563 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 CCDC124Q96CT7 223 aaKnown RBP12.77□□□□□ -0.37
SHANK2-201ENST00000338508 NLRP4Q96MN2 994 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 DNAJC17Q9NVM6 304 aaKnown RBP12.77□□□□□ -0.37
SHANK2-201ENST00000338508 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 MYO1FO00160 1098 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 SLCO1A2P46721 670 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 MTERF2Q49AM1 385 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 SLFN13Q68D06 897 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 NUDCD3Q8IVD9 361 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 HEXIM2Q96MH2 286 aaKnown RBP12.77□□□□□ -0.37
SHANK2-201ENST00000338508 CAPS2Q9BXY5 557 aa12.77□□□□□ -0.37
SHANK2-201ENST00000338508 MCF2LO15068 1137 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
SHANK2-201ENST00000338508 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
SHANK2-201ENST00000338508 GOLGA8FQ08AF8 430 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 GOLGA8DPQ0D2H9 430 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 PSMD2Q13200 908 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 LRRC41Q15345 812 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 C8orf34Q49A92 452 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 HIPK4Q8NE63 616 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
SHANK2-201ENST00000338508 MIS12Q9H081 205 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 WDR64B1ANS9 1081 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 DNAJC8O75937 253 aaPredicted RBP12.76□□□□□ -0.37
SHANK2-201ENST00000338508 RPN1P04843 607 aaKnown RBP12.76□□□□□ -0.37
SHANK2-201ENST00000338508 CERS3Q8IU89 383 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 NUDCD1Q96RS6 583 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 PASKQ96RG2 1323 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 NPATQ14207 1427 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 PI4K2BG5E9Z4 385 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 FAM133BQ5BKY9 247 aaKnown RBP12.76□□□□□ -0.37
SHANK2-201ENST00000338508 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 KBTBD3Q8NAB2 608 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 TSC1Q92574 1164 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 XPOTO43592 962 aaKnown RBP12.76□□□□□ -0.37
SHANK2-201ENST00000338508 KRT1P04264 644 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 PYGLP06737 847 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 RAP1GDS1P52306 607 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 DCAF4L1Q3SXM0 396 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 MIS18BP1Q6P0N0 1132 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 DSTYKQ6XUX3 929 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
SHANK2-201ENST00000338508 MSH2P43246 934 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 ZWILCHQ9H900 591 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 PCDHA1Q9Y5I3 950 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 ATP2B4P23634 1241 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 OR6B2Q6IFH4 312 aa12.76□□□□□ -0.37
SHANK2-201ENST00000338508 PNMA6EA0A0J9YXQ4 647 aa12.75□□□□□ -0.37
SHANK2-201ENST00000338508 PFKFB1P16118 471 aa12.75□□□□□ -0.37
SHANK2-201ENST00000338508 RASGRP4Q8TDF6 673 aa12.75□□□□□ -0.37
SHANK2-201ENST00000338508 IP6K1Q92551 441 aa12.75□□□□□ -0.37
SHANK2-201ENST00000338508 MAML1Q92585 1016 aa12.75□□□□□ -0.37
SHANK2-201ENST00000338508 FAM49AQ9H0Q0 323 aaPredicted RBP12.75□□□□□ -0.37
SHANK2-201ENST00000338508 DBNDD1Q9H9R9 158 aa12.75□□□□□ -0.37
SHANK2-201ENST00000338508 AFF4Q9UHB7 1163 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms