RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 MEIS2O14770 477 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 EIF3JO75822 258 aaKnown RBP17.61■□□□□ 0.41
PRKN-201ENST00000338468 ADD1P35611 737 aaKnown RBP17.61■□□□□ 0.41
PRKN-201ENST00000338468 CDK7P50613 346 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 PGM5Q15124 567 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 PPP2R5BQ15173 497 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 SEPT14Q6ZU15 432 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 SH3RF1Q7Z6J0 888 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 VSIG10LQ86VR7 867 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 FCHSD1Q86WN1 690 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 TM6SF1Q9BZW5 370 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 PDLIM7Q9NR12 457 aa17.61■□□□□ 0.41
PRKN-201ENST00000338468 PIK3CDO00329 1044 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 NKRFO15226 690 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRKN-201ENST00000338468 TXNP10599 105 aaKnown RBP17.6■□□□□ 0.41
PRKN-201ENST00000338468 EVCP57679 992 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 FGD1P98174 961 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 TOB2Q14106 344 aaPredicted RBP17.6■□□□□ 0.41
PRKN-201ENST00000338468 TTLL4Q14679 1199 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 LY6KQ17RY6 165 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 TYW1BQ6NUM6 668 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 ANKRD33Q7Z3H0 272 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 OR6J1Q8NGC5 347 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 MAFAQ8NHW3 353 aaPredicted RBP17.6■□□□□ 0.41
PRKN-201ENST00000338468 GPKOWQ92917 476 aaPredicted RBP eCLIP17.6■□□□□ 0.41
PRKN-201ENST00000338468 GLT1D1Q96MS3 346 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 CDX2Q99626 313 aaPredicted RBP17.6■□□□□ 0.41
PRKN-201ENST00000338468 GRIN2DO15399 1336 aa17.6■□□□□ 0.41
PRKN-201ENST00000338468 TRIM43BA6NCK2 446 aa17.59■□□□□ 0.41
PRKN-201ENST00000338468 MYCLP12524 364 aaPredicted RBP17.59■□□□□ 0.41
PRKN-201ENST00000338468 METAP2P50579 478 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRKN-201ENST00000338468 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
PRKN-201ENST00000338468 SLC43A3Q8NBI5 491 aa17.59■□□□□ 0.41
PRKN-201ENST00000338468 TRIM43Q96BQ3 446 aaPredicted RBP17.59■□□□□ 0.41
PRKN-201ENST00000338468 ZFP91Q96JP5 570 aaPredicted RBP17.59■□□□□ 0.41
PRKN-201ENST00000338468 UPF3BQ9BZI7 483 aaKnown RBP17.59■□□□□ 0.41
PRKN-201ENST00000338468 PRDM5Q9NQX1 630 aaPredicted RBP17.59■□□□□ 0.41
PRKN-201ENST00000338468 DDX41Q9UJV9 622 aaKnown RBP17.59■□□□□ 0.41
PRKN-201ENST00000338468 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
PRKN-201ENST00000338468 V9GY48 417 aaPredicted RBP17.59■□□□□ 0.41
PRKN-201ENST00000338468 A6NJR5 290 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 ARVCFO00192 962 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 PQBP1O60828 265 aaKnown RBP17.58■□□□□ 0.4
PRKN-201ENST00000338468 SEC24BO95487 1268 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 ITGB8P26012 769 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.4
PRKN-201ENST00000338468 ARHGAP1Q07960 439 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 FAAP100Q0VG06 881 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 HEATR3Q7Z4Q2 680 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 TOX2Q96NM4 488 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 PSTPIP2Q9H939 334 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 CYP46A1Q9Y6A2 500 aa17.58■□□□□ 0.4
PRKN-201ENST00000338468 CDH23Q9H251 3354 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 A0A0U1RQG5 324 aaPredicted RBP17.57■□□□□ 0.4
PRKN-201ENST00000338468 ZEB2O60315 1214 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 CABYRO75952 493 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 PDIA3P30101 505 aaKnown RBP17.57■□□□□ 0.4
PRKN-201ENST00000338468 CCND2P30279 289 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 PSMC6P62333 389 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 PURAQ00577 322 aaKnown RBP17.57■□□□□ 0.4
PRKN-201ENST00000338468 SHHQ15465 462 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 NTRK3Q16288 839 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 UBE2SQ16763 222 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 SMARCC2Q8TAQ2 1214 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 VTI1AQ96AJ9 217 aa17.57■□□□□ 0.4
PRKN-201ENST00000338468 SPTBN5Q9NRC6 3674 aaKnown RBP17.57■□□□□ 0.4
PRKN-201ENST00000338468 PRUNE2Q8WUY3 3088 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 STXBP3O00186 592 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 KIAA0355O15063 1070 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 CLTBP09497 229 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 CPT1AP50416 773 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
PRKN-201ENST00000338468 SP2Q02086 613 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 FAM126BQ8IXS8 530 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 CUL5Q93034 780 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 IL17RAQ96F46 866 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 LARP6Q9BRS8 491 aaKnown RBP17.56■□□□□ 0.4
PRKN-201ENST00000338468 SEMA6BQ9H3T3 888 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 MRVI1Q9Y6F6 885 aa17.56■□□□□ 0.4
PRKN-201ENST00000338468 CCDC196A0A1B0GTZ2 297 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 GH1P01241 217 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 MYL3P08590 195 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 SEMA3FQ13275 785 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 ITGA7Q13683 1181 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 PKN1Q16512 942 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 AFG1LQ8WV93 481 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 BADQ92934 168 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 EMID1Q96A84 441 aaPredicted RBP17.55■□□□□ 0.4
PRKN-201ENST00000338468 INPP4AQ96PE3 977 aaPredicted RBP17.55■□□□□ 0.4
PRKN-201ENST00000338468 NCOA5Q9HCD5 579 aaKnown RBP17.55■□□□□ 0.4
PRKN-201ENST00000338468 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 BARHL2Q9NY43 387 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 TBX21Q9UL17 535 aa17.55■□□□□ 0.4
PRKN-201ENST00000338468 SCN10AQ9Y5Y9 1956 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 DCDC2CA8MYV0 355 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 CD4P01730 458 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 MMP3P08254 477 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms