RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CAMKK1Q8N5S9 505 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 DNERQ8NFT8 737 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 NINJ1Q92982 152 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ZNF622Q969S3 477 aaKnown RBP eCLIP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 RMDN1Q96DB5 314 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 BARD1Q99728 777 aaKnown RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ZC3H12CQ9C0D7 883 aaKnown RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ADAM7Q9H2U9 754 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 CD209Q9NNX6 404 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ENAMQ9NRM1 1142 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 FAM184BQ9ULE4 1060 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 PCM1Q15154 2024 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 USP17L5A8MUK1 530 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 KIF28PB7ZC32 967 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 SRFP11831 508 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 LTBRP36941 435 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 FLT3LGP49771 235 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ZNF132P52740 706 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 PFKPQ01813 784 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 MGAT3Q09327 533 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ASCL5Q7RTU5 278 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 GPR142Q7Z601 462 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ADSSL1Q8N142 457 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 TRPV1Q8NER1 839 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 EXOC4Q96A65 974 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 VPS45Q9NRW7 570 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 TMEM51Q9NW97 253 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 IFT57Q9NWB7 429 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ZDHHC7Q9NXF8 308 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 IGKV6D-41A0A0C4DH26 115 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ASB14A6NK59 587 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 B4DLN1 442 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 CAPN9O14815 690 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 MYCP01106 439 aaPredicted RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 AFPP02771 609 aaKnown RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 HNRNPA1P09651 372 aaKnown RBP eCLIP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ERCC3P19447 782 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 CAPN3P20807 821 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 CD82P27701 267 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ARID4AP29374 1257 aaPredicted RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 PPM1AP35813 382 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 PSEN2P49810 448 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 MRPL12P52815 198 aaKnown RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ADAM17P78536 824 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 CDC42EP1Q00587 391 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 PTCRAQ6ISU1 281 aaPredicted RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 APOBEC3HQ6NTF7 200 aaKnown RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 UNQ6494/PRO21346Q6UXR6 183 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 CCNI2Q6ZMN8 369 aaPredicted RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 MTSS1LQ765P7 747 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 NPM2Q86SE8 214 aaKnown RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 NPAS4Q8IUM7 802 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 NME8Q8N427 588 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 FAM160A2Q8N612 972 aaPredicted RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ZNF280CQ8ND82 737 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 OLIG1Q8TAK6 271 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 COG1Q8WTW3 980 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 BAP1Q92560 729 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 NTNG2Q96CW9 530 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 HERC2P3Q9BVR0 1158 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 NIFKQ9BYG3 293 aaKnown RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 NRSN2Q9GZP1 204 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 DBF4Q9UBU7 674 aaPredicted RBP2.02□□□□□ -2.09
LINC00643-201ENST00000334389 CHIC2Q9UKJ5 165 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 MINPP1Q9UNW1 487 aa2.02□□□□□ -2.09
LINC00643-201ENST00000334389 ATRXP46100 2492 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 RAD50Q92878 1312 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 A6NJR5 290 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 ZNF862O60290 1169 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 GJB5O95377 273 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 ASNSP08243 561 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 AGAP20933 346 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 ACLYP53396 1101 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 EPHA5P54756 1037 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 BACE1P56817 501 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 MTHFSDQ2M296 383 aaKnown RBP2.01□□□□□ -2.09
LINC00643-201ENST00000334389 TMEM67Q5HYA8 995 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 HFE2Q6ZVN8 426 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 LONP2Q86WA8 852 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 CEP76Q8TAP6 659 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 KHSRPQ92945 711 aaKnown RBP eCLIP2.01□□□□□ -2.09
LINC00643-201ENST00000334389 NOL10Q9BSC4 688 aaKnown RBP2.01□□□□□ -2.09
LINC00643-201ENST00000334389 MTA3Q9BTC8 594 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 ABHD16BQ9H3Z7 469 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 NXF1Q9UBU9 619 aaKnown RBP2.01□□□□□ -2.09
LINC00643-201ENST00000334389 WTIPA6NIX2 430 aaPredicted RBP2.01□□□□□ -2.09
LINC00643-201ENST00000334389 ARHGAP6O43182 974 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 WISP1O95388 367 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 EOMESO95936 686 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 AMHP03971 560 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 PAX1P15863 534 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 CAP2P40123 477 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 RBM25P49756 843 aaKnown RBP2.01□□□□□ -2.09
LINC00643-201ENST00000334389 GABPAQ06546 454 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 DMWDQ09019 674 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 TRAF1Q13077 416 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 LAMC2Q13753 1193 aa2.01□□□□□ -2.09
LINC00643-201ENST00000334389 BYSLQ13895 437 aaKnown RBP2.01□□□□□ -2.09
LINC00643-201ENST00000334389 RRP1BQ14684 758 aaKnown RBP2.01□□□□□ -2.09
LINC00643-201ENST00000334389 MTFR1Q15390 333 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms