RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 FZD1Q9UP38 647 aa19.02■□□□□ 0.64
DDX41-201ENST00000330503 ABCB11O95342 1321 aa19.02■□□□□ 0.64
DDX41-201ENST00000330503 STAT3P40763 770 aa19.01■□□□□ 0.63
DDX41-201ENST00000330503 ASIC1P78348 528 aa19.01■□□□□ 0.63
DDX41-201ENST00000330503 ZKSCAN4Q969J2 545 aaPredicted RBP19.01■□□□□ 0.63
DDX41-201ENST00000330503 SBF1O95248 1867 aa19.01■□□□□ 0.63
DDX41-201ENST00000330503 A0A1B0GTH6 734 aa19.01■□□□□ 0.63
DDX41-201ENST00000330503 MSH4O15457 936 aa19.01■□□□□ 0.63
DDX41-201ENST00000330503 ICAM1P05362 532 aa19.01■□□□□ 0.63
DDX41-201ENST00000330503 CCT6AP40227 531 aaKnown RBP19.01■□□□□ 0.63
DDX41-201ENST00000330503 SCYL3Q8IZE3 742 aa19.01■□□□□ 0.63
DDX41-201ENST00000330503 WDR18Q9BV38 432 aa19.01■□□□□ 0.63
DDX41-201ENST00000330503 IGLV3-22A0A075B6J6 115 aa19■□□□□ 0.63
DDX41-201ENST00000330503 PDE4DQ08499 809 aa19■□□□□ 0.63
DDX41-201ENST00000330503 STK4Q13043 487 aa19■□□□□ 0.63
DDX41-201ENST00000330503 MTMR2Q13614 643 aa19■□□□□ 0.63
DDX41-201ENST00000330503 FAM20AQ96MK3 541 aa19■□□□□ 0.63
DDX41-201ENST00000330503 GGA3Q9NZ52 723 aa19■□□□□ 0.63
DDX41-201ENST00000330503 PMS1P54277 932 aaKnown RBP19■□□□□ 0.63
DDX41-201ENST00000330503 SPP2Q13103 211 aa19■□□□□ 0.63
DDX41-201ENST00000330503 CNNM4Q6P4Q7 775 aa19■□□□□ 0.63
DDX41-201ENST00000330503 EXOC1Q9NV70 894 aa19■□□□□ 0.63
DDX41-201ENST00000330503 SLC26A4O43511 780 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 FCER1AP12319 257 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 SKILP12757 684 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 PTPRAP18433 802 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 ZNF76P36508 570 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 TBX2Q13207 712 aaPredicted RBP18.99■□□□□ 0.63
DDX41-201ENST00000330503 CLEC4DQ8WXI8 215 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 WRNIP1Q96S55 665 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 ADD3Q9UEY8 706 aaKnown RBP18.99■□□□□ 0.63
DDX41-201ENST00000330503 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 DOCK1Q14185 1865 aa18.99■□□□□ 0.63
DDX41-201ENST00000330503 TRIM49BA6NDI0 452 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 TEX33O43247 280 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 MED24O75448 989 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 VCAM1P19320 739 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 TPD52L1Q16890 204 aaPredicted RBP18.98■□□□□ 0.63
DDX41-201ENST00000330503 CCDC150Q8NCX0 1101 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 HPS3Q969F9 1004 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 CCDC47Q96A33 483 aaKnown RBP18.98■□□□□ 0.63
DDX41-201ENST00000330503 HOOK2Q96ED9 719 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 SLC38A10Q9HBR0 1119 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 LIMA1Q9UHB6 759 aaKnown RBP18.98■□□□□ 0.63
DDX41-201ENST00000330503 KIAA1024Q9UPX6 916 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 UTRNP46939 3433 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 PVALEFA0A1B0GWK0 134 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 LRRC10BA6NIK2 292 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 DDNO94850 711 aaPredicted RBP18.98■□□□□ 0.63
DDX41-201ENST00000330503 BACE1P56817 501 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.98■□□□□ 0.63
DDX41-201ENST00000330503 UNC13DQ70J99 1090 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 DYMQ7RTS9 669 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 IRF2BP1Q8IU81 584 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 DHTKD1Q96HY7 919 aaPredicted RBP18.98■□□□□ 0.63
DDX41-201ENST00000330503 TANGO6Q9C0B7 1094 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 VAV3Q9UKW4 847 aa18.98■□□□□ 0.63
DDX41-201ENST00000330503 POTEB3A0JP26 581 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 POTECB2RU33 542 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 E9PMD0 336 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 HSD17B4P51659 736 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 USP14P54578 494 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 UBXN2AP68543 259 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 POTEBQ6S5H4 581 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 DDX12PQ92771 950 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 DNAJC19Q96DA6 116 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 NT5C3AQ9H0P0 336 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 RPAP3Q9H6T3 665 aaPredicted RBP18.97■□□□□ 0.63
DDX41-201ENST00000330503 PPP1R9AQ9ULJ8 1098 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 KDM3AQ9Y4C1 1321 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 SSC5DA1L4H1 1573 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 SPATA31C1P0DKV0 1188 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 COBLL1Q53SF7 1204 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 TTI2Q6NXR4 508 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 KIAA0895Q8NCT3 520 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 ZNF280CQ8ND82 737 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 KLRG1Q96E93 195 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 RAVER2Q9HCJ3 691 aaKnown RBP18.97■□□□□ 0.63
DDX41-201ENST00000330503 PICK1Q9NRD5 415 aa18.97■□□□□ 0.63
DDX41-201ENST00000330503 POLR2AP24928 1970 aaKnown RBP18.96■□□□□ 0.63
DDX41-201ENST00000330503 NFIBO00712 420 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 FLOT1O75955 427 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 PBX1P40424 430 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 EHHADHQ08426 723 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 STIM1Q13586 685 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 KRT31Q15323 416 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 NCAPH2Q6IBW4 605 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 CATSPER3Q86XQ3 398 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 DUSP9Q99956 384 aaKnown RBP18.96■□□□□ 0.63
DDX41-201ENST00000330503 GTPBP4Q9BZE4 634 aaKnown RBP18.96■□□□□ 0.63
DDX41-201ENST00000330503 LRRC27Q9C0I9 530 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 PPP2R3BQ9Y5P8 575 aa18.96■□□□□ 0.63
DDX41-201ENST00000330503 PSMA7O14818 248 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 SFPQP23246 707 aaKnown RBP eCLIP18.95■□□□□ 0.62
DDX41-201ENST00000330503 GOLGA8FQ08AF8 430 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 GOLGA8DPQ0D2H9 430 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 TCP11X2Q5H9J9 407 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 SPECC1LQ69YQ0 1117 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 CPXCR1Q8N123 301 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 CTAGE1Q96RT6 745 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms