RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TMCO1Q9UM00 188 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 IGKV5-2P06315 115 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 IL2RBP14784 551 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 MARCKSP29966 332 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-201ENST00000328923 IFI16Q16666 785 aaKnown RBP13.01□□□□□ -0.33
SHMT2-201ENST00000328923 OTUD7BQ6GQQ9 843 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 TMTC1Q8IUR5 882 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 MMGT1Q8N4V1 131 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 CCDC51Q96ER9 411 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 MOV10L1Q9BXT6 1211 aaKnown RBP13.01□□□□□ -0.33
SHMT2-201ENST00000328923 STRN4Q9NRL3 753 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 NRAPQ86VF7 1730 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
SHMT2-201ENST00000328923 MYL6BP14649 208 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 PLOD1Q02809 727 aaPredicted RBP13□□□□□ -0.33
SHMT2-201ENST00000328923 ZNF827Q17R98 1081 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 CCDC80Q76M96 950 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 SDR16C5Q8N3Y7 309 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 MED15Q96RN5 788 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 BRD8Q9H0E9 1235 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 ABCF2Q9UG63 623 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 TRPC5Q9UL62 973 aaPredicted RBP13□□□□□ -0.33
SHMT2-201ENST00000328923 STK38LQ9Y2H1 464 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 GMEB1Q9Y692 573 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13□□□□□ -0.33
SHMT2-201ENST00000328923 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 RNF225M0QZC1 329 aaPredicted RBP13□□□□□ -0.33
SHMT2-201ENST00000328923 IGF2BP3O00425 579 aaKnown RBP eCLIP13□□□□□ -0.33
SHMT2-201ENST00000328923 FOXN1O15353 648 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 KRT16P08779 473 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 CDC25AP30304 524 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 GUCY2FP51841 1108 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 EVA1CP58658 441 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
SHMT2-201ENST00000328923 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 TFCP2Q12800 502 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 RABL6Q3YEC7 729 aaPredicted RBP13□□□□□ -0.33
SHMT2-201ENST00000328923 IQCEQ6IPM2 695 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 CHADLQ6NUI6 762 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 SEPT14Q6ZU15 432 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 CD302Q8IX05 232 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 KIF2BQ8N4N8 673 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 ARFGAP2Q8N6H7 521 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 ZBTB8BQ8NAP8 495 aaPredicted RBP13□□□□□ -0.33
SHMT2-201ENST00000328923 CCDC197Q8NCU1 140 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 KLHDC4Q8TBB5 520 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 IWS1Q96ST2 819 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 JADE2Q9NQC1 790 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 STIM2Q9P246 746 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 CNOT8Q9UFF9 292 aaKnown RBP13□□□□□ -0.33
SHMT2-201ENST00000328923 HPS5Q9UPZ3 1129 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 LRRC42Q9Y546 428 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 NWD2Q9ULI1 1742 aa13□□□□□ -0.33
SHMT2-201ENST00000328923 GLI3P10071 1580 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 GSTT1P30711 240 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 MDM2Q00987 491 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-201ENST00000328923 KLC1Q07866 573 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 ADCY1Q08828 1119 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 GCKRQ14397 625 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 HAUS3Q68CZ6 603 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 PI16Q6UXB8 463 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 EXOC3L1Q86VI1 746 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 CNGA4Q8IV77 575 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 TRAPPC9Q96Q05 1148 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 MAP3K14Q99558 947 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 DBNDD2Q9BQY9 259 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 SMARCAL1Q9NZC9 954 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 NFU1Q9UMS0 254 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 GOLGA8BA8MQT2 603 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 CPLX1O14810 134 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 HNRNPRO43390 633 aaKnown RBP12.99□□□□□ -0.33
SHMT2-201ENST00000328923 SUPT3HO75486 399 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 FLOT1O75955 427 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 ERCC5P28715 1186 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-201ENST00000328923 PBX1P40424 430 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 CCDC92Q53HC0 331 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-201ENST00000328923 CYP26C1Q6V0L0 522 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 APTXQ7Z2E3 356 aaKnown RBP12.99□□□□□ -0.33
SHMT2-201ENST00000328923 FNBP4Q8N3X1 1017 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-201ENST00000328923 TMBIM4Q9HC24 238 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 NKX1-2Q9UD57 310 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-201ENST00000328923 KCNH3Q9ULD8 1083 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 BARX2Q9UMQ3 279 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-201ENST00000328923 MYH7P12883 1935 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 ECM29Q5VYK3 1845 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
SHMT2-201ENST00000328923 ATRNO75882 1429 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 TMCC1O94876 653 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 CHGBP05060 677 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 SPATA31D3P0C874 917 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 VCAM1P19320 739 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 ATP6V1C1P21283 382 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 CARSP49589 748 aaKnown RBP12.98□□□□□ -0.33
SHMT2-201ENST00000328923 NCALDP61601 193 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-201ENST00000328923 P3H1Q32P28 736 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms