RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 SEC24CP53992 1094 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 MRPS25P82663 173 aaKnown RBP12.45□□□□□ -0.42
GINS3-202ENST00000328514 HLFQ16534 295 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 HGSNATQ68CP4 663 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 CNNM4Q6P4Q7 775 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 CCDC121Q6ZUS5 278 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 MIGA1Q8NAN2 632 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 LRRC15Q8TF66 581 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 SGSM3Q96HU1 749 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 C8orf37Q96NL8 207 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 ISCUQ9H1K1 167 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 NFS1Q9Y697 457 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 AHDC1Q5TGY3 1603 aaPredicted RBP12.44□□□□□ -0.42
GINS3-202ENST00000328514 SHANK3Q9BYB0 1731 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 MAGEB6P1A0A0J9YX57 407 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 ADAMTS3O15072 1205 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 NCK2O43639 380 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 FGFR1OPO95684 399 aaKnown RBP12.44□□□□□ -0.42
GINS3-202ENST00000328514 STARD3NLO95772 234 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 CYP7A1P22680 504 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 NT5C2P49902 561 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 PDE4DQ08499 809 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 IFFO1Q0D2I5 559 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 XRCC4Q13426 336 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 CUL1Q13616 776 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 NAB2Q15742 525 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 SNCBQ16143 134 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 RNF187Q5TA31 235 aaPredicted RBP12.44□□□□□ -0.42
GINS3-202ENST00000328514 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 FUKQ8N0W3 1084 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 SDR42E1Q8WUS8 393 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 TAF1DQ9H5J8 278 aaPredicted RBP12.44□□□□□ -0.42
GINS3-202ENST00000328514 LRP2BPQ9P2M1 347 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 EP400Q96L91 3159 aa12.44□□□□□ -0.42
GINS3-202ENST00000328514 FAM205AQ6ZU69 1335 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 GOLGA6L10A6NI86 522 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 LRRC53A6NM62 1247 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 E7EVH7 732 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 TNNC1P63316 161 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 AMPD3Q01432 767 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 MEI1Q5TIA1 1274 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 AGBL2Q5U5Z8 902 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 CYB5D1Q6P9G0 228 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 RUFY4Q6ZNE9 571 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 HELBQ8NG08 1087 aaPredicted RBP12.43□□□□□ -0.42
GINS3-202ENST00000328514 MIEF2Q96C03 454 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 MS4A14Q96JA4 679 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 OSBPL7Q9BZF2 842 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 TMEM60Q9H2L4 133 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 SEMA6BQ9H3T3 888 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 VEZTQ9HBM0 779 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 LUC7LQ9NQ29 371 aaKnown RBP12.43□□□□□ -0.42
GINS3-202ENST00000328514 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
GINS3-202ENST00000328514 TRMT112Q9UI30 125 aaKnown RBP12.43□□□□□ -0.42
GINS3-202ENST00000328514 PLAAQ9Y263 795 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 PP2D1A8MPX8 630 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 BTNL10A8MVZ5 291 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
GINS3-202ENST00000328514 MYZAPP0CAP1 466 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 GHRP10912 638 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 ECHS1P30084 290 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 KIF5BP33176 963 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 NF2P35240 595 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 CHRNA2Q15822 529 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 NBPF9Q3BBW0 867 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 ANKRD20A8PQ5CZ79 823 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 KIAA0895Q8NCT3 520 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 RASSF8Q8NHQ8 419 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 IFT81Q8WYA0 676 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
GINS3-202ENST00000328514 LRRC45Q96CN5 670 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 PSMB7Q99436 277 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 ODF2LQ9ULJ1 636 aa12.43□□□□□ -0.42
GINS3-202ENST00000328514 ZNF804BA4D1E1 1349 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 ESYT3A0FGR9 886 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 ZSCAN5CA6NGD5 496 aaPredicted RBP12.42□□□□□ -0.42
GINS3-202ENST00000328514 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
GINS3-202ENST00000328514 VEGFAP15692 232 aaPredicted RBP12.42□□□□□ -0.42
GINS3-202ENST00000328514 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
GINS3-202ENST00000328514 PLCG1P19174 1290 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 SLC8A1P32418 973 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 SLC1A4P43007 532 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 RASSF7Q02833 373 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 LRRC63Q05C16 580 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 CRYMQ14894 314 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 RRAGAQ7L523 313 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 DNAJC10Q8IXB1 793 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 USP38Q8NB14 1042 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 BANK1Q8NDB2 785 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 CCDC114Q96M63 670 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 FAM207AQ9NSI2 230 aaPredicted RBP12.42□□□□□ -0.42
GINS3-202ENST00000328514 MYH1P12882 1939 aa12.42□□□□□ -0.42
GINS3-202ENST00000328514 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 PVALEFA0A1B0GWK0 134 aa12.41□□□□□ -0.42
GINS3-202ENST00000328514 SMIM22K7EJ46 135 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms