RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 KIAA1024Q9UPX6 916 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 PPP2R2CQ9Y2T4 447 aa13.89□□□□□ -0.19
RNF4-201ENST00000314289 MEIS1O00470 390 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 OPLAHO14841 1288 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 FANCGO15287 622 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 CFBP00751 764 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 ARHGAP4P98171 946 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 KCNB1Q14721 858 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 ERCC6LQ2NKX8 1250 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 PPP4R3AQ6IN85 833 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 LRRN4CLQ8ND94 238 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 DDX12PQ92771 950 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 CTAGE1Q96RT6 745 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
RNF4-201ENST00000314289 ZBTB21Q9ULJ3 1066 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 ASTN2O75129 1339 aaPredicted RBP13.88□□□□□ -0.19
RNF4-201ENST00000314289 WNT10BO00744 389 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 PBX1P40424 430 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 KLK7P49862 253 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 STIM1Q13586 685 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 REXO1L1PQ8IX06 675 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 FAM151AQ8WW52 585 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 C7orf25Q9BPX7 421 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 RAB34Q9BZG1 259 aa13.88□□□□□ -0.19
RNF4-201ENST00000314289 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
RNF4-201ENST00000314289 B4DLN1 442 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 FAM86B1E9PN63 330 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 ARHGAP6O43182 974 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 FAM86B2P0C5J1 330 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 SPDYE2Q495Y8 402 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 TTI2Q6NXR4 508 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 GMCL1P1Q8NEA9 526 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 ZHX3Q9H4I2 956 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 LIMA1Q9UHB6 759 aaKnown RBP13.87□□□□□ -0.19
RNF4-201ENST00000314289 FZD1Q9UP38 647 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 SPDYE3A6NKU9 549 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
RNF4-201ENST00000314289 STAT2P52630 851 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 CT47A1Q5JQC4 288 aaPredicted RBP13.87□□□□□ -0.19
RNF4-201ENST00000314289 TAF3Q5VWG9 929 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 RAD54LQ92698 747 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 GMCL1Q96IK5 515 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 LZTFL1Q9NQ48 299 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 PIM2Q9P1W9 311 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 H7C1D1 291 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 AMPD3Q01432 767 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 CYP4A11Q02928 519 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 POTEGQ6S5H5 508 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 POTEEQ6S8J3 1075 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 ANKRD20A12PQ8NF67 263 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 BBXQ8WY36 941 aaPredicted RBP13.87□□□□□ -0.19
RNF4-201ENST00000314289 P2RX5Q93086 422 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 FGFBP2Q9BYJ0 223 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 CUEDC2Q9H467 287 aa13.87□□□□□ -0.19
RNF4-201ENST00000314289 HERC5Q9UII4 1024 aaKnown RBP13.87□□□□□ -0.19
RNF4-201ENST00000314289 NCAPH2Q6IBW4 605 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 SEMA6BQ9H3T3 888 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 ARHGEF10LQ9HCE6 1279 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 ZNF446Q9NWS9 450 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 BCS1LQ9Y276 419 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 MFAP3LO75121 409 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 PDIA5Q14554 519 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 PRAMEF18Q5VWM3 479 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 SAMD7Q7Z3H4 446 aa13.86□□□□□ -0.19
RNF4-201ENST00000314289 CCDC47Q96A33 483 aaKnown RBP13.86□□□□□ -0.19
RNF4-201ENST00000314289 MRPL44Q9H9J2 332 aaKnown RBP13.86□□□□□ -0.19
RNF4-201ENST00000314289 STX10O60499 249 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 MED24O75448 989 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 PSMC6P62333 389 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 GJA3Q9Y6H8 435 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 ARFGEF1Q9Y6D6 1849 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 LRRC10BA6NIK2 292 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 ABL1P00519 1130 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 MYL1P05976 194 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 ZNF76P36508 570 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 TRIM65Q6PJ69 517 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 JDP2Q8WYK2 163 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 BCAS3Q9H6U6 928 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 MYOZ2Q9NPC6 264 aa13.85□□□□□ -0.19
RNF4-201ENST00000314289 MAGEC2Q9UBF1 373 aaPredicted RBP13.85□□□□□ -0.19
RNF4-201ENST00000314289 CCDC66A2RUB6 948 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 RASA3Q14644 834 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 ACRBPQ8NEB7 543 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 CNOT6LQ96LI5 555 aaKnown RBP13.84□□□□□ -0.19
RNF4-201ENST00000314289 WDR24Q96S15 920 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 TUBGCP2Q9BSJ2 902 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 TMX2Q9Y320 296 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 CHMP2AO43633 222 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 CCNE1P24864 410 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 KRT9P35527 623 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 MTIF2P46199 727 aaKnown RBP13.84□□□□□ -0.19
RNF4-201ENST00000314289 RASSF7Q02833 373 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 SPAG1Q07617 926 aa13.84□□□□□ -0.19
RNF4-201ENST00000314289 TBC1D10BQ4KMP7 808 aaPredicted RBP13.84□□□□□ -0.19
RNF4-201ENST00000314289 DALRD3Q5D0E6 543 aaKnown RBP13.84□□□□□ -0.19
RNF4-201ENST00000314289 CIAPIN1Q6FI81 312 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms