RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 GRAPLQ8TC17 118 aaPredicted RBP20.27■□□□□ 0.84
CDK5R1-201ENST00000313401 EXOC4Q96A65 974 aa20.27■□□□□ 0.84
CDK5R1-201ENST00000313401 RPGRIP1Q96KN7 1286 aa20.27■□□□□ 0.84
CDK5R1-201ENST00000313401 XRCC5P13010 732 aaKnown RBP20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 SF3B3Q15393 1217 aaKnown RBP20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 DPH5Q9H2P9 285 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 RGPD1P0DJD0 1748 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 ATP2B4P23634 1241 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 FBXO33Q7Z6M2 555 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 UHMK1Q8TAS1 419 aaKnown RBP20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 CUEDC2Q9H467 287 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 EHD2Q9NZN4 543 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 RPS6KA4O75676 772 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 TNIP1Q15025 636 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 TTC31Q49AM3 519 aaPredicted RBP20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 SLFN13Q68D06 897 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 DAAM2Q86T65 1068 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 CPXCR1Q8N123 301 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 SELENOSQ9BQE4 189 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 HSD3B7Q9H2F3 369 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 LIG3P49916 1009 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 MED4Q9NPJ6 270 aa20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 RRP15Q9Y3B9 282 aaKnown RBP20.26■□□□□ 0.83
CDK5R1-201ENST00000313401 COL5A2P05997 1499 aaPredicted RBP20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 HOXA13P31271 388 aaPredicted RBP20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 CEP85LQ5SZL2 805 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 RBM26Q5T8P6 1007 aaKnown RBP20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 IPO4Q8TEX9 1081 aaKnown RBP20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 LACRTQ9GZZ8 138 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 NT5C3AQ9H0P0 336 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 RGPD2P0DJD1 1756 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 HEXIM1O94992 359 aaKnown RBP20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 TEKT1Q969V4 418 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 FUT8Q9BYC5 575 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 PPANQ9NQ55 473 aaKnown RBP20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 HOMER2Q9NSB8 354 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 JRKLQ9Y4A0 524 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 SETD1AO15047 1707 aaKnown RBP20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 CYP2C19P33261 490 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 STAT3P40763 770 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 RETREG2Q8NC44 543 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 COL4A3BPQ9Y5P4 624 aa20.25■□□□□ 0.83
CDK5R1-201ENST00000313401 GGCXP38435 758 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 TBX2Q13207 712 aaPredicted RBP20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 CCDC93Q567U6 631 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 POTEB3A0JP26 581 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 POTECB2RU33 542 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 HGSO14964 777 aaPredicted RBP20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 PRPF6O94906 941 aaKnown RBP20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 AKR1B1P15121 316 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 POTEBQ6S5H4 581 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 CCDC170Q8IYT3 715 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 TTLL1O95922 423 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 PAK2Q13177 524 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 CERKLQ49MI3 558 aaPredicted RBP20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 CDKAL1Q5VV42 579 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 STXBP4Q6ZWJ1 553 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 PROCA1Q8NCQ7 364 aaPredicted RBP20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 MXD3Q9BW11 206 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 ANAPC4Q9UJX5 808 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 CAPN11Q9UMQ6 739 aa20.24■□□□□ 0.83
CDK5R1-201ENST00000313401 NPHP3-ACAD11A0A0J9YXS1 232 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 EXOC3O60645 756 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 RASA1P20936 1047 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 PPFIA1Q13136 1202 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 SH3GLB2Q9NR46 395 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 EMILIN3Q9NT22 766 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 NFU1Q9UMS0 254 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 THRAP3Q9Y2W1 955 aaKnown RBP20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 GOLGA6L10A0A0M3HER8 536 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 PLA2G4BP0C869 781 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 TNFAIP3P21580 790 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 GPSM2P81274 684 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 PDXDC2PQ6P474 469 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 CAMTA1Q9Y6Y1 1673 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 STXBP3O00186 592 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 CAPS2Q9BXY5 557 aa20.23■□□□□ 0.83
CDK5R1-201ENST00000313401 H3BQF6 201 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 ICA1Q05084 483 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 GPATCH11Q8N954 259 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 MYMKA6NI61 221 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 LMBR1Q8WVP7 490 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 MS4A14Q96JA4 679 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 FRMD4BQ9Y2L6 1034 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 RNF225M0QZC1 329 aaPredicted RBP20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 USP14P54578 494 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 EXOC3L4Q17RC7 722 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 AP1M1Q9BXS5 423 aa20.22■□□□□ 0.83
CDK5R1-201ENST00000313401 FLOT1O75955 427 aa20.21■□□□□ 0.83
CDK5R1-201ENST00000313401 NEFHP12036 1026 aa20.21■□□□□ 0.83
CDK5R1-201ENST00000313401 ASPRV1Q53RT3 343 aa20.21■□□□□ 0.83
CDK5R1-201ENST00000313401 UNC13DQ70J99 1090 aa20.21■□□□□ 0.83
CDK5R1-201ENST00000313401 MAGEF1Q9HAY2 307 aa20.21■□□□□ 0.83
CDK5R1-201ENST00000313401 STK17AQ9UEE5 414 aa20.21■□□□□ 0.83
CDK5R1-201ENST00000313401 TRIM66O15016 1216 aa20.21■□□□□ 0.83
CDK5R1-201ENST00000313401 LRRC1Q9BTT6 524 aa20.21■□□□□ 0.83
CDK5R1-201ENST00000313401 CCSER1Q9C0I3 900 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms