RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 DDX25Q9UHL0 483 aaKnown RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 SERTAD1Q9UHV2 236 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 ZNF214Q9UL59 606 aaPredicted RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 RIPK3Q9Y572 518 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 LCTP09848 1927 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 CYP3A7-CYP3A51PA0A087WV96 503 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 A0A087WWV3 80 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 H0YGN5 161 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 CTAGE5O15320 804 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 PEX10O60683 326 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 GCFC2P16383 781 aaKnown RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 CYP3A7P24462 503 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 UBXN2AP68543 259 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 MOXD1Q6UVY6 613 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 LENG9Q96B70 501 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 TRERF1Q96PN7 1200 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 GBA2Q9HCG7 927 aaPredicted RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 MTMR10Q9NXD2 777 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 CTDP1Q9Y5B0 961 aaPredicted RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 FAM86B1E9PN63 330 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 ATP2A1O14983 1001 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 CELF2O95319 508 aaKnown RBP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 CYP3A4P08684 503 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 FAM86B2P0C5J1 330 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 HOXA7P31268 230 aaPredicted RBP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 CIITAP33076 1130 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 OAZ1P54368 228 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 TYRO3Q06418 890 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 E2F4Q16254 413 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 SNRNP48Q6IEG0 339 aaKnown RBP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 SLC30A10Q6XR72 485 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 IGSF22Q8N9C0 903 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 SDF4Q9BRK5 362 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 GRPEL1Q9HAV7 217 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 KCNMB3Q9NPA1 279 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 RNF146Q9NTX7 359 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 HOXC10Q9NYD6 342 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 RPTORQ8N122 1335 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 UNCXA6NJT0 531 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 ITGBL1O95965 494 aaPredicted RBP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 PRR29P0C7W0 189 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 TECP42680 631 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 TXKP42681 527 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 FXR2P51116 673 aaKnown RBP eCLIP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 FKBP1BP68106 108 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 MDM2Q00987 491 aaPredicted RBP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 PNOCQ13519 176 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 Q4G0T1 1027 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 CST9Q5W186 159 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 GPAT2Q6NUI2 795 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 LBX2Q6XYB7 198 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 GRAMD1CQ8IYS0 662 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 CNNM3Q8NE01 707 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 CYP2W1Q8TAV3 490 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 ETNPPLQ8TBG4 499 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 SYTL5Q8TDW5 730 aaPredicted RBP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 LRRC15Q8TF66 581 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 DHX58Q96C10 678 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 SLC10A4Q96EP9 437 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 UIMC1Q96RL1 719 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 NAP1L4Q99733 375 aaKnown RBP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 MMTAG2Q9BU76 263 aaKnown RBP7.87□□□□□ -1.15
PTCD2-201ENST00000308077 BTBD7Q9P203 1132 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 KIAA1468Q9P260 1216 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 AGTPBP1Q9UPW5 1226 aa7.87□□□□□ -1.15
PTCD2-201ENST00000308077 IGLV3-22A0A075B6J6 115 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 POTEMA6NI47 508 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 CNMDO75829 334 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 CCDC192P0DO97 292 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 RPS6P62753 249 aaKnown RBP7.86□□□□□ -1.15
PTCD2-201ENST00000308077 KARSQ15046 597 aaKnown RBP7.86□□□□□ -1.15
PTCD2-201ENST00000308077 PRR16Q569H4 304 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 MCF2L2Q86YR7 1114 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 DEFB123Q8N688 67 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 RNF214Q8ND24 703 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 IL31RAQ8NI17 732 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 ZFP91Q96JP5 570 aaPredicted RBP7.86□□□□□ -1.15
PTCD2-201ENST00000308077 AK8Q96MA6 479 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 PURBQ96QR8 312 aaKnown RBP7.86□□□□□ -1.15
PTCD2-201ENST00000308077 TEX13BQ9BXU2 312 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 CCSER1Q9C0I3 900 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 ASCC2Q9H1I8 757 aaPredicted RBP7.86□□□□□ -1.15
PTCD2-201ENST00000308077 PNMA2Q9UL42 364 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 FRMPD4Q14CM0 1322 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 CHD8Q9HCK8 2581 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 SLFN14P0C7P3 912 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 STAT3P40763 770 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 SNAPC2Q13487 334 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 PLS1Q14651 629 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 NAALADL2Q58DX5 795 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 PDXDC2PQ6P474 469 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 SASS6Q6UVJ0 657 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 NSMFQ6X4W1 530 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 SH3RF1Q7Z6J0 888 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 ELOA2Q8IYF1 753 aaPredicted RBP7.86□□□□□ -1.15
PTCD2-201ENST00000308077 TAAR1Q96RJ0 339 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 TTC12Q9H892 705 aaPredicted RBP7.86□□□□□ -1.15
PTCD2-201ENST00000308077 DISC1Q9NRI5 854 aa7.86□□□□□ -1.15
PTCD2-201ENST00000308077 TUBE1Q9UJT0 475 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms