RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SP7Q8TDD2 431 aaPredicted RBP14.01□□□□□ -0.17
SMIM4-201ENST00000307106 PRRX2Q99811 253 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 RANBP17Q9H2T7 1088 aaKnown RBP14.01□□□□□ -0.17
SMIM4-201ENST00000307106 GTF2IRD1Q9UHL9 959 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 STX8Q9UNK0 236 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 MTMR7Q9Y216 660 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 GPAA1O43292 621 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 GFRA3O60609 400 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 LGR5O75473 907 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 ARIH2O95376 493 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 APPP05067 770 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 MMP3P08254 477 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 FOXK2Q01167 660 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 RNF207Q6ZRF8 634 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 RPAINQ86UA6 219 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 AFG1LQ8WV93 481 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 APPBP2Q92624 585 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 KAT2BQ92831 832 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 EDAQ92838 391 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 OSBP2Q969R2 916 aa14□□□□□ -0.17
SMIM4-201ENST00000307106 MBTPS2O43462 519 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 RAB11FIP3O75154 756 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 GNAT2P19087 354 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 CASTP20810 708 aaKnown RBP13.99□□□□□ -0.17
SMIM4-201ENST00000307106 EDNRBP24530 442 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 LTBRP36941 435 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 TCF15Q12870 199 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 MBTPS1Q14703 1052 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 CLUL1Q15846 466 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 CCDC96Q2M329 555 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 ZNF618Q5T7W0 954 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 TRAF7Q6Q0C0 670 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 IFNL3Q8IZI9 196 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 C7orf31Q8N865 590 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 DNERQ8NFT8 737 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 PBXIP1Q96AQ6 731 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 HDAC6Q9UBN7 1215 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 SPTBN4Q9H254 2564 aa13.99□□□□□ -0.17
SMIM4-201ENST00000307106 NCK2O43639 380 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 HMMRO75330 724 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 SLC3A2P08195 630 aaKnown RBP13.98□□□□□ -0.17
SMIM4-201ENST00000307106 SLC16A2P36021 539 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 RPS6P62753 249 aaKnown RBP13.98□□□□□ -0.17
SMIM4-201ENST00000307106 PTK7Q13308 1070 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
SMIM4-201ENST00000307106 PKN1Q16512 942 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 FBXO11Q86XK2 927 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 SUGP1Q8IWZ8 645 aaKnown RBP13.98□□□□□ -0.17
SMIM4-201ENST00000307106 TMEM192Q8IY95 271 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 DBF4BQ8NFT6 615 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 CLEC4DQ8WXI8 215 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 WNT8BQ93098 351 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 YME1L1Q96TA2 773 aa13.98□□□□□ -0.17
SMIM4-201ENST00000307106 DOCK5Q9H7D0 1870 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 TMEM221A6NGB7 291 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 B4DLN1 442 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 PATL2C9JE40 543 aaKnown RBP13.97□□□□□ -0.17
SMIM4-201ENST00000307106 M0R296 226 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 GH1P01241 217 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 MRPL12P52815 198 aaKnown RBP13.97□□□□□ -0.17
SMIM4-201ENST00000307106 DLX2Q07687 328 aaPredicted RBP13.97□□□□□ -0.17
SMIM4-201ENST00000307106 ARHGAP1Q07960 439 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 CTC1Q2NKJ3 1217 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
SMIM4-201ENST00000307106 SYDE2Q5VT97 1194 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 TTBK2Q6IQ55 1244 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 CCDC62Q6P9F0 684 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 TRIM67Q6ZTA4 783 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 CHST3Q7LGC8 479 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 KBTBD3Q8NAB2 608 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 DCAF4Q8WV16 495 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 ALG1Q9BT22 464 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 FAM86C1Q9NVL1 165 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 LOXHD1Q8IVV2 1947 aa13.97□□□□□ -0.17
SMIM4-201ENST00000307106 TSPY2A6NKD2 308 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 M0R2C6 588 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 STXBP3O00186 592 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 NMT2O60551 498 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 PSEN2P49810 448 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 PPARAQ07869 468 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 SMAD4Q13485 552 aaKnown RBP13.96□□□□□ -0.17
SMIM4-201ENST00000307106 DGKDQ16760 1214 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 LY6KQ17RY6 165 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 KATNAL1Q9BW62 490 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 NACAP1Q9BZK3 213 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 MYO15AQ9UKN7 3530 aa13.96□□□□□ -0.17
SMIM4-201ENST00000307106 PLXNA4Q9HCM2 1894 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 CACNA1HO95180 2353 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 RNF113AO15541 343 aaKnown RBP13.95□□□□□ -0.18
SMIM4-201ENST00000307106 TBX10O75333 385 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 UPP2O95045 317 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 MFSD10Q14728 455 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 KIAA0753Q2KHM9 967 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 PLEKHG4Q58EX7 1191 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 SEPT14Q6ZU15 432 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 SIRT2Q8IXJ6 389 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms